Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_F16
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    31   0.014
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    25   0.91 
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    25   0.91 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.7  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    21   8.5  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 30.7 bits (66), Expect = 0.014
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 211 ALFSK*LIFKI*CIIMLTAYLICSRYCCDRNHLKTIYPIFRKP 339
           A+ S  + F + CI+ML  Y  C  YC  + H+K+I  + + P
Sbjct: 193 AVVSSSISFYVPCIVMLGIY--CRLYCYAQKHVKSIRAVTKLP 233


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 13/56 (23%), Positives = 24/56 (42%)
 Frame = -1

Query: 679 VAACXVVACTTEDFXSCAQRYXNEESXVEIENLVIEMTTFKNTYNETLQCDNMLYL 512
           +A   ++A   ED     + + NEE       +  ++ +FK   N++    N L L
Sbjct: 12  MAMVAIMAAPVEDEFEPLEHFENEERADRHRRVTCDLLSFKGQVNDSACAANCLSL 67


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 13/56 (23%), Positives = 24/56 (42%)
 Frame = -1

Query: 679 VAACXVVACTTEDFXSCAQRYXNEESXVEIENLVIEMTTFKNTYNETLQCDNMLYL 512
           +A   ++A   ED     + + NEE       +  ++ +FK   N++    N L L
Sbjct: 12  MAMVAIMAAPVEDEFEPLEHFENEERADRHRRVTCDLLSFKGQVNDSACAANCLSL 67


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 372 KNFVRSMIVAVASFFVFSLPF 434
           +N +R ++  V +FF+   PF
Sbjct: 281 RNVIRMLVAVVVAFFICWAPF 301


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 271 LICSRYCCDRNHLKT 315
           +IC R  C RN L T
Sbjct: 39  VICERVYCSRNSLMT 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,493
Number of Sequences: 438
Number of extensions: 2573
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)