Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_F02
(380 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0646 + 20250684-20250686,20251522-20251701,20251899-202519... 75 3e-14
07_03_0641 + 20214245-20214247,20215086-20215265,20215463-202155... 75 3e-14
07_03_0226 + 15395380-15395382,15396993-15397172,15397286-153973... 75 3e-14
07_03_0648 + 20257442-20257528,20257688-20257867,20258055-202581... 73 1e-13
07_03_0643 + 20239224-20239310,20239470-20239649,20239837-202399... 73 1e-13
07_03_0640 + 20207497-20207554,20208457-20208482,20208522-202087... 73 1e-13
07_03_0639 + 20203902-20203988,20204152-20204331,20204529-202046... 73 1e-13
07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561 40 5e-04
07_03_1268 + 25328448-25328506,25328589-25328768,25328872-253289... 29 1.2
06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998 29 1.6
12_02_0879 + 23960084-23961551,23961796-23962184 28 2.2
01_01_1106 + 8750597-8754031 28 2.2
05_05_0226 + 23442971-23443857,23444209-23446324 28 2.9
11_06_0050 + 19631164-19631987,19632103-19634023 27 3.8
02_01_0043 + 300122-300907,301447-301722,302347-302481 27 3.8
12_02_1088 - 25954506-25954652,25954769-25954918,25955011-259551... 27 5.0
10_08_0397 + 17571492-17571664,17571875-17572034,17572140-175722... 27 6.6
03_03_0266 - 16014740-16015045,16015566-16015601,16015623-160156... 27 6.6
11_01_0266 - 2010572-2011879 26 8.7
>07_03_0646 +
20250684-20250686,20251522-20251701,20251899-20251973,
20252072-20252131
Length = 105
Score = 74.5 bits (175), Expect = 3e-14
Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = -1
Query: 314 MVNVPKQRRTYXXXXXXXXXXXV--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXX 141
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 140 XXXXXXKIVLRLEC 99
KIVL+L+C
Sbjct: 61 KAKTTKKIVLKLQC 74
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -2
Query: 154 PSSKRRQKPLRKLCSVLSVLIXKVRSQVALKRCKHFELGGDKKRKG 17
P ++ K +K+ L K SQ +KRCKHFE+GGDKK KG
Sbjct: 56 PVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0641 +
20214245-20214247,20215086-20215265,20215463-20215537,
20215636-20215695
Length = 105
Score = 74.5 bits (175), Expect = 3e-14
Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = -1
Query: 314 MVNVPKQRRTYXXXXXXXXXXXV--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXX 141
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 140 XXXXXXKIVLRLEC 99
KIVL+L+C
Sbjct: 61 KAKTTKKIVLKLQC 74
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -2
Query: 154 PSSKRRQKPLRKLCSVLSVLIXKVRSQVALKRCKHFELGGDKKRKG 17
P ++ K +K+ L K SQ +KRCKHFE+GGDKK KG
Sbjct: 56 PVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0226 +
15395380-15395382,15396993-15397172,15397286-15397360,
15397466-15397525
Length = 105
Score = 74.5 bits (175), Expect = 3e-14
Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = -1
Query: 314 MVNVPKQRRTYXXXXXXXXXXXV--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXX 141
MVNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 140 XXXXXXKIVLRLEC 99
KIVL+L+C
Sbjct: 61 KAKTTKKIVLKLQC 74
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -2
Query: 154 PSSKRRQKPLRKLCSVLSVLIXKVRSQVALKRCKHFELGGDKKRKG 17
P ++ K +K+ L K SQ +KRCKHFE+GGDKK KG
Sbjct: 56 PVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0648 +
20257442-20257528,20257688-20257867,20258055-20258129,
20258230-20258289
Length = 133
Score = 72.5 bits (170), Expect = 1e-13
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = -1
Query: 311 VNVPKQRRTYXXXXXXXXXXXV--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 138
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 137 XXXXXKIVLRLEC 99
KIVL+L+C
Sbjct: 90 AKTTKKIVLKLQC 102
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -2
Query: 154 PSSKRRQKPLRKLCSVLSVLIXKVRSQVALKRCKHFELGGDKKRKG 17
P ++ K +K+ L K SQ +KRCKHFE+GGDKK KG
Sbjct: 84 PVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0643 +
20239224-20239310,20239470-20239649,20239837-20239911,
20240012-20240071
Length = 133
Score = 72.5 bits (170), Expect = 1e-13
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = -1
Query: 311 VNVPKQRRTYXXXXXXXXXXXV--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 138
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 137 XXXXXKIVLRLEC 99
KIVL+L+C
Sbjct: 90 AKTTKKIVLKLQC 102
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -2
Query: 154 PSSKRRQKPLRKLCSVLSVLIXKVRSQVALKRCKHFELGGDKKRKG 17
P ++ K +K+ L K SQ +KRCKHFE+GGDKK KG
Sbjct: 84 PVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0640 +
20207497-20207554,20208457-20208482,20208522-20208701,
20208891-20208965,20209062-20209121
Length = 132
Score = 72.5 bits (170), Expect = 1e-13
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = -1
Query: 311 VNVPKQRRTYXXXXXXXXXXXV--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 138
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 29 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 88
Query: 137 XXXXXKIVLRLEC 99
KIVL+L+C
Sbjct: 89 AKTTKKIVLKLQC 101
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -2
Query: 154 PSSKRRQKPLRKLCSVLSVLIXKVRSQVALKRCKHFELGGDKKRKG 17
P ++ K +K+ L K SQ +KRCKHFE+GGDKK KG
Sbjct: 83 PVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 128
>07_03_0639 +
20203902-20203988,20204152-20204331,20204529-20204603,
20204696-20204755
Length = 133
Score = 72.5 bits (170), Expect = 1e-13
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = -1
Query: 311 VNVPKQRRTYXXXXXXXXXXXV--SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 138
VNVPK ++TY +QYKK K+ +AQG+RRYDRKQ GYGGQ+KP+F
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 89
Query: 137 XXXXXKIVLRLEC 99
KIVL+L+C
Sbjct: 90 AKTTKKIVLKLQC 102
Score = 44.0 bits (99), Expect = 4e-05
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -2
Query: 154 PSSKRRQKPLRKLCSVLSVLIXKVRSQVALKRCKHFELGGDKKRKG 17
P ++ K +K+ L K SQ +KRCKHFE+GGDKK KG
Sbjct: 84 PVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561
Length = 62
Score = 40.3 bits (90), Expect = 5e-04
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -2
Query: 133 KPLRKLCSVLSVLIXKVRSQVALKRCKHFELGGDKKRKG 17
K +K+ L K SQ +KRCKHF++GGDKK KG
Sbjct: 20 KTTKKIVLKLQCQSCKHYSQHPIKRCKHFKIGGDKKGKG 58
>07_03_1268 +
25328448-25328506,25328589-25328768,25328872-25328974,
25329095-25329119,25329587-25329614,25330603-25330755,
25331339-25333421,25333666-25334983,25335256-25335339,
25335756-25335769
Length = 1348
Score = 29.1 bits (62), Expect = 1.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -2
Query: 241 STKSPRKGTLPRVEDVMIVNSRV 173
++ SP+K T PRVED M++ S +
Sbjct: 451 ASSSPQKQTAPRVEDDMVITSSI 473
>06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998
Length = 391
Score = 28.7 bits (61), Expect = 1.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 295 SAGRTAKNVNATKYTRYHSTKSPRKGTLPR 206
S+GRTA++ + R+H T RKG LPR
Sbjct: 99 SSGRTARDAAVAQQERHHDTIKRRKG-LPR 127
>12_02_0879 + 23960084-23961551,23961796-23962184
Length = 618
Score = 28.3 bits (60), Expect = 2.2
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = -2
Query: 307 TYQNSAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRRQKP 128
T ++S G +K V ATK+ R +S +P+V+++ V S TV+ + S RQ
Sbjct: 315 TIESSNG--SKVVRATKFNRDKKFRSTVASNVPKVKEIK-VTSPATVMDQS-SKPTRQSK 370
Query: 127 LRKL 116
L+ L
Sbjct: 371 LKSL 374
>01_01_1106 + 8750597-8754031
Length = 1144
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 184 LRS*RLLPWAACLSLDFLYCDTLCTLWHLHFLQYVLRC 297
L+S LL C +L+ L DT+C+L +LHFL + RC
Sbjct: 540 LQSLHLLNLKGCGNLEILP-DTICSLQNLHFLN-LSRC 575
>05_05_0226 + 23442971-23443857,23444209-23446324
Length = 1000
Score = 27.9 bits (59), Expect = 2.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 196 RLLPWAACLSLDFLYCDTLCTLWHLHFLQY 285
R+L C LD + +C LWHL +L +
Sbjct: 595 RVLDLQECSDLDDDHLKYICKLWHLKYLSF 624
>11_06_0050 + 19631164-19631987,19632103-19634023
Length = 914
Score = 27.5 bits (58), Expect = 3.8
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 196 RLLPWAACLSLDFLYCDTLCTLWHLHFLQ 282
R+L ++ C ++ +C +C L+HL +L+
Sbjct: 577 RVLDFSGCDKVENQHCKDICKLFHLRYLR 605
>02_01_0043 + 300122-300907,301447-301722,302347-302481
Length = 398
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 15 CPFLFLSPPSSKCLHLFNATCDL 83
CP F SPPSS C F ++ DL
Sbjct: 45 CPLGFTSPPSSSCPLGFTSSYDL 67
>12_02_1088 -
25954506-25954652,25954769-25954918,25955011-25955116,
25955247-25955569,25955656-25955790,25956310-25956444,
25956445-25956525,25956619-25956807,25956935-25957127,
25957244-25957350,25957457-25957531,25957619-25957774,
25957968-25958051,25958152-25958265,25958345-25958440,
25958543-25958633,25958721-25958836,25958934-25959093,
25960390-25960634
Length = 900
Score = 27.1 bits (57), Expect = 5.0
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = -2
Query: 298 NSAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRRQKPLRK 119
+S A V+A KY RY T +VE + RV P PSS RRQ+ +R+
Sbjct: 16 SSPTAAAPQVDAGKYVRY---------TPEQVEAL----ERVYTECPKPSSLRRQQLIRE 62
Query: 118 LCSVLSVLIXK-VRSQVALKRCK 53
C +LS + K ++ +RC+
Sbjct: 63 -CPILSNIEPKQIKVWFQNRRCR 84
>10_08_0397 +
17571492-17571664,17571875-17572034,17572140-17572222,
17572333-17572468,17572515-17572610,17573105-17573218,
17573322-17573405,17573493-17573648,17573744-17573818,
17574318-17574424,17574508-17574688,17574832-17575020,
17575397-17575477,17575621-17575755,17576007-17576329,
17576503-17576608,17576734-17576883,17577034-17577180
Length = 831
Score = 26.6 bits (56), Expect = 6.6
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -2
Query: 178 RVTVVSPNPSSKRRQKPLRKLCSVLSVLIXK-VRSQVALKRCKHFELGGDKKRK 20
RV P PSS RRQ+ LR C +L+ + K ++ +RC+ DK+RK
Sbjct: 19 RVYAECPKPSSSRRQQLLRD-CPILANIEPKQIKVWFQNRRCR------DKQRK 65
>03_03_0266 -
16014740-16015045,16015566-16015601,16015623-16015643,
16016331-16016591,16017504-16018985,16019834-16019989,
16020154-16020277,16020399-16020615,16020877-16021774,
16022947-16023291,16023371-16023565,16023751-16024453,
16024866-16025467
Length = 1781
Score = 26.6 bits (56), Expect = 6.6
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 265 ATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSS 146
+T T + + K P G++ + NS V +V P PS+
Sbjct: 821 STNITNFANLKEPFDGSIDLANVENVTNSNVVMVQPVPST 860
>11_01_0266 - 2010572-2011879
Length = 435
Score = 26.2 bits (55), Expect = 8.7
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = -1
Query: 245 SQYKKSKERHAAQGRRRYDR 186
S+ +K+++RH A+G+ YD+
Sbjct: 3 SEKRKTRDRHGARGKASYDK 22
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,845,842
Number of Sequences: 37544
Number of extensions: 182271
Number of successful extensions: 532
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 624784784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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