Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_E04
         (838 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0666 + 27086568-27086975,27087073-27087477,27088542-270886...    32   0.65 
02_01_0503 + 3669758-3670059,3670351-3670870                           30   2.6  
07_03_0446 - 18285132-18285221,18285437-18285499,18285805-182858...    29   3.5  
04_04_1285 - 32382614-32382720,32383032-32383710,32383816-323839...    29   6.1  

>04_04_0666 +
           27086568-27086975,27087073-27087477,27088542-27088635,
           27088731-27088768,27088853-27088999,27089167-27089266,
           27090001-27090953,27091512-27091569,27092904-27093022
          Length = 773

 Score = 31.9 bits (69), Expect = 0.65
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 602 WEICPQWEICPQWVTCHQWESCHPWE 525
           W+  P+W+  P+W T   WES HP E
Sbjct: 592 WDSEPKWDNGPKWDTELTWESDHPIE 617


>02_01_0503 + 3669758-3670059,3670351-3670870
          Length = 273

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = -1

Query: 313 GKD--SC*RSRYEWLWRTW*STRQQWLQRITTKSTRWW 206
           G+D  SC RS   W W  W   ++ W   +  +  RWW
Sbjct: 92  GRDPFSC-RSGQRWNWSPWHVIQRPWWSPLPGQGIRWW 128


>07_03_0446 - 18285132-18285221,18285437-18285499,18285805-18285867,
            18286079-18286129,18286413-18286506,18286696-18286856,
            18287089-18287145,18287380-18287493,18287934-18287999,
            18288063-18288266,18289207-18289284,18289669-18289788,
            18290425-18290491,18290635-18290735,18290820-18290936,
            18292024-18292107,18292181-18292309,18292385-18292510,
            18292622-18292696,18292814-18292947,18293032-18293137,
            18293220-18293276,18294387-18294573,18295244-18295407,
            18296129-18296353,18296538-18296744,18297043-18297375,
            18297604-18297993
          Length = 1220

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +3

Query: 105  RSEIIHLRRYRKYTNLLLTNLKRIYCLV*SFCYDHHLVDFVV----ILWSHCCRVDYHVL 272
            R++I   R+     + L   ++R+Y +  +F YD   VD        LW  CC +   ++
Sbjct: 812  RAQITQGRKVLSALDSLSKLVERLYLMSFAFMYDLLEVDLETRHFFFLWCKCCTIHCSLV 871

Query: 273  HNHSYL 290
            H   YL
Sbjct: 872  HFKKYL 877


>04_04_1285 -
           32382614-32382720,32383032-32383710,32383816-32383926,
           32384007-32384065,32384163-32384271,32384387-32384575,
           32384650-32385476,32385501-32385633
          Length = 737

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
 Frame = -1

Query: 796 HDETPYGYGTN*TPYETTPW---FYAHASSTHVRHATHGCY-ATLRKYASNGKFA-TKR* 632
           H  TPY +    T Y +TP+    ++   S   +H  H  Y +T  +Y S+  +  T   
Sbjct: 556 HPSTPYQHQAQSTSYPSTPYQDQIHSSYPSNPTQHQIHLNYPSTPNQYQSHSTYPNTPFP 615

Query: 631 YATNGKYASNGKYAPNGKYAPN 566
              N  Y SNG   P G Y PN
Sbjct: 616 GHGNSVYDSNG--GP-GPYNPN 634


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,116,330
Number of Sequences: 37544
Number of extensions: 324255
Number of successful extensions: 782
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)