Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_E04
         (838 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X51653-1|CAA35965.1|  494|Drosophila melanogaster empty spiracle...    30   4.5  
BT021310-1|AAX33458.1|  494|Drosophila melanogaster RE15812p pro...    30   4.5  
AY070982-1|AAL48604.1|  306|Drosophila melanogaster RE07882p pro...    30   4.5  
AE014297-1771|AAF54999.1|  494|Drosophila melanogaster CG2988-PA...    30   4.5  
AE014297-436|AAF51889.2|  306|Drosophila melanogaster CG1169-PA ...    30   4.5  
X66270-1|CAA46985.1|  497|Drosophila melanogaster ems W13 protein.     29   6.0  

>X51653-1|CAA35965.1|  494|Drosophila melanogaster empty spiracles
           homeotic protein protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +3

Query: 243 HCCRVDYHVLHNHSYLDL*HESFPYNHAPIADF*KILHH 359
           H      HVLH H  +   H   P +H  I +  + LHH
Sbjct: 111 HLSPAQQHVLHQHLLMQQQHPGTPKSHQDIQELLQRLHH 149


>BT021310-1|AAX33458.1|  494|Drosophila melanogaster RE15812p
           protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +3

Query: 243 HCCRVDYHVLHNHSYLDL*HESFPYNHAPIADF*KILHH 359
           H      HVLH H  +   H   P +H  I +  + LHH
Sbjct: 111 HLSPAQQHVLHQHLLMQQQHPGTPKSHQDIQELLQRLHH 149


>AY070982-1|AAL48604.1|  306|Drosophila melanogaster RE07882p
           protein.
          Length = 306

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = +3

Query: 354 HHLSRL---HCNYFLLHNFDHKILPHYILHHFVNIADFH 461
           HH+  +   H  + + H+ +H I+PH+I HH  +  D H
Sbjct: 227 HHIEHVVPHHIEHVVPHHIEH-IVPHHIDHHLEHHIDHH 264


>AE014297-1771|AAF54999.1|  494|Drosophila melanogaster CG2988-PA
           protein.
          Length = 494

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +3

Query: 243 HCCRVDYHVLHNHSYLDL*HESFPYNHAPIADF*KILHH 359
           H      HVLH H  +   H   P +H  I +  + LHH
Sbjct: 111 HLSPAQQHVLHQHLLMQQQHPGTPKSHQDIQELLQRLHH 149


>AE014297-436|AAF51889.2|  306|Drosophila melanogaster CG1169-PA
           protein.
          Length = 306

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = +3

Query: 354 HHLSRL---HCNYFLLHNFDHKILPHYILHHFVNIADFH 461
           HH+  +   H  + + H+ +H I+PH+I HH  +  D H
Sbjct: 227 HHIEHVVPHHIEHVVPHHIEH-IVPHHIDHHLEHHIDHH 264


>X66270-1|CAA46985.1|  497|Drosophila melanogaster ems W13 protein.
          Length = 497

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +3

Query: 243 HCCRVDYHVLHNHSYLDL*HESFPYNHAPIADF*KILHH 359
           H      HVLH H  +   H   P +H  I +  + LHH
Sbjct: 114 HLSPAQQHVLHQHLLMQHQHPGTPKSHQDIQELLQRLHH 152


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,999,764
Number of Sequences: 53049
Number of extensions: 573970
Number of successful extensions: 1650
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1643
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)