Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_E04
         (838 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106576-4|AAC78176.1|  473|Caenorhabditis elegans Hypothetical ...    32   0.58 
Z81513-5|CAB04175.1|  332|Caenorhabditis elegans Hypothetical pr...    30   2.3  
AL032635-3|CAB63374.1|  635|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z81593-5|CAB04743.1|  332|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z81525-3|CAB04258.1|  467|Caenorhabditis elegans Hypothetical pr...    28   9.5  
U88173-9|AAK21384.3|  320|Caenorhabditis elegans Hypothetical pr...    28   9.5  
U23529-12|AAL13323.1|  561|Caenorhabditis elegans Cation diffusi...    28   9.5  
U23529-11|AAK39165.1|  519|Caenorhabditis elegans Cation diffusi...    28   9.5  
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ...    28   9.5  

>AF106576-4|AAC78176.1|  473|Caenorhabditis elegans Hypothetical
           protein W07E6.2 protein.
          Length = 473

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
 Frame = -3

Query: 719 LHTCQACHPWVLCHP*EICLQWEICHQEVVCHQWEICLQW------EICPQWEICPQWVT 558
           LHTC++   WVLC    I    +       C   EIC+ W      +I    +   QW+T
Sbjct: 140 LHTCKSHKSWVLC----IAWSPDATKIASACKNGEICI-WNAKTGEQIGKTLKRHKQWIT 194

Query: 557 CHQWESCHPWETC 519
              W+  H   TC
Sbjct: 195 SLAWQPMHKDPTC 207


>Z81513-5|CAB04175.1|  332|Caenorhabditis elegans Hypothetical
           protein F26D2.4 protein.
          Length = 332

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 516 VASFPRVA*LPLVACYPLGAYFPLGAYFPLEAYFPLVAYYLL 641
           + S P +   P+V+ YPLG  + LG    L  YF   + YL+
Sbjct: 69  ILSIPVIL-FPIVSGYPLGLLYYLGVPIRLMVYFGFTSLYLV 109


>AL032635-3|CAB63374.1|  635|Caenorhabditis elegans Hypothetical
           protein Y51A2A.5 protein.
          Length = 635

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 656 WEICHQEV-VCHQWEICLQWEICPQWEICPQWVTCH 552
           W  C  EV +C+ W    +W++  +    P W +CH
Sbjct: 592 WSSCRSEVGLCYGW----RWDVSQEPLCTPAWTSCH 623


>Z81593-5|CAB04743.1|  332|Caenorhabditis elegans Hypothetical
           protein T20B3.5 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 546 PLVACYPLGAYFPLGAYFPLEAYF-PLVAYYLLVA 647
           P++A YPLG    +G     + YF  LV  Y++VA
Sbjct: 80  PVLAGYPLGVLKEIGVSVEAQVYFVVLVGAYMMVA 114


>Z81525-3|CAB04258.1|  467|Caenorhabditis elegans Hypothetical
           protein F33A8.4 protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
 Frame = -3

Query: 671 EICLQWEICHQEVVCHQWEICL-----QWEICPQWEIC--PQWVTCHQWESCHPWETC 519
           E+C ++ +  + V C + + C      +W  C + + C  P++V C Q   CH +  C
Sbjct: 405 EVCDRY-VTERNVHCDRCQACTSVEQGKWNHCEKCDKCVKPRYVHCAQCARCHLYGRC 461


>U88173-9|AAK21384.3|  320|Caenorhabditis elegans Hypothetical
           protein F46F11.7 protein.
          Length = 320

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
 Frame = -3

Query: 725 CLLHTCQACHPWVLCHP*EICLQWEICHQ--EVVCHQWEICLQWEICPQ--WEICPQWVT 558
           C+L+ CQ     V C    +C   + C +  E  C     C    +C Q   ++ PQ   
Sbjct: 107 CILNRCQG----VSCDEGSMCRDGK-CEKVLETFCIGHADCGPNMLCQQNKCQLKPQEPL 161

Query: 557 CHQWESCHPWETCHHG 510
           C+    C P E CHHG
Sbjct: 162 CN----CQPHEICHHG 173


>U23529-12|AAL13323.1|  561|Caenorhabditis elegans Cation diffusion
           facilitator familyprotein 1, isoform b protein.
          Length = 561

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 742 GWSHRGSNWSHTHRGSHHVIHN 807
           G SH G +  H+H GSH   HN
Sbjct: 238 GHSHGGGSHGHSHGGSHGHSHN 259


>U23529-11|AAK39165.1|  519|Caenorhabditis elegans Cation diffusion
           facilitator familyprotein 1, isoform a protein.
          Length = 519

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 742 GWSHRGSNWSHTHRGSHHVIHN 807
           G SH G +  H+H GSH   HN
Sbjct: 196 GHSHGGGSHGHSHGGSHGHSHN 217


>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
           protein Y113G7B.12 protein.
          Length = 1042

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = -1

Query: 664 ASNGKFATKR*YATNGKYASNGKYAPNGKYAPNG*HATNGSHATLGK 524
           + NG+ +     + NG+ + NG+ + NG+ + NG    NG  +  G+
Sbjct: 312 SDNGEESDNEEASDNGEESDNGEASDNGEESDNGEERDNGEASDNGE 358


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,110,423
Number of Sequences: 27780
Number of extensions: 298026
Number of successful extensions: 835
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)