Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_D14
         (694 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0535 - 16850704-16853001,16854055-16854115,16854228-168543...    29   3.5  
05_01_0514 - 4270936-4272084                                           29   4.6  
02_01_0583 + 4320543-4321613,4321725-4321967,4323506-4323883           28   8.1  

>04_03_0535 -
           16850704-16853001,16854055-16854115,16854228-16854323,
           16854394-16854521,16855016-16855067,16855182-16855274,
           16855473-16855590,16856456-16856609,16857512-16857643,
           16859136-16859216,16859353-16859507,16860118-16860343,
           16860423-16860507,16860593-16860689,16861785-16861949,
           16862046-16862121,16863041-16863103,16863193-16863359,
           16863495-16863669,16863743-16863835,16864694-16864810,
           16865589-16865778,16866092-16866126
          Length = 1618

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 251 SVTEALIALFIILNCYGHLRNIGINRFVY 165
           S  +AL+  FIILNCYG    + +++ VY
Sbjct: 262 SFLKALLLYFIILNCYGLHVTLDLSKGVY 290


>05_01_0514 - 4270936-4272084
          Length = 382

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -2

Query: 162 YTIIVHL*CSIILYRTRNKLLFSF 91
           Y +IVHL C++I Y TR+  L ++
Sbjct: 323 YVVIVHLDCNLIYYITRDYTLMAY 346


>02_01_0583 + 4320543-4321613,4321725-4321967,4323506-4323883
          Length = 563

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -3

Query: 200 HLRNIGINRFVYFTP**FIC--NVRSFCIEQETNCYFPLFITKSVV 69
           HL + G+   V   P    C  NV + CIE E+N  FP  +  S++
Sbjct: 377 HL-HFGVRNEVKMLPSFLRCFPNVETLCIEVESNPPFPALVVSSII 421


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,260,091
Number of Sequences: 37544
Number of extensions: 268737
Number of successful extensions: 492
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)