Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_D14
         (694 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026213-8|AAB71303.1|  226|Caenorhabditis elegans Hypothetical ...    30   1.4  
U80024-6|AAW88410.1|  300|Caenorhabditis elegans Serpentine rece...    28   5.5  
U39993-1|AAA81086.1|  594|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>AF026213-8|AAB71303.1|  226|Caenorhabditis elegans Hypothetical
           protein F08F1.3 protein.
          Length = 226

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 21/48 (43%), Positives = 27/48 (56%)
 Frame = -2

Query: 669 SNYKLETSSFSLQFLIIIRIAKFNQITTDLVSSFQSPILESNILFFYL 526
           S+ KL+T   SL FLI+I IAKF         SF+  +  SNI F +L
Sbjct: 128 SSEKLKTVHNSLIFLIVIFIAKFVNF------SFKHVVFSSNIKFLHL 169


>U80024-6|AAW88410.1|  300|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 8 protein.
          Length = 300

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/53 (20%), Positives = 30/53 (56%)
 Frame = -2

Query: 456 VLLYFSLMYIVMSYVIYICTYIAYNI*F*R*LMTSTLETEIIYMVMARWPYHT 298
           ++L+F  +++ ++Y ++ C Y+ ++I +     T  L  + +++V   +P  T
Sbjct: 46  MILFFYRLFLDVTYNVFACAYMTFSILY--SFFTEELREQQVFIVYVGFPLQT 96


>U39993-1|AAA81086.1|  594|Caenorhabditis elegans Hypothetical
           protein F47E1.3 protein.
          Length = 594

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 297 YQRCQNSSNKKFFIWFCNRSID 232
           Y RC ++ N+KF    CNRS +
Sbjct: 484 YTRCVDNGNRKFPCTICNRSFE 505


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,724,015
Number of Sequences: 27780
Number of extensions: 296715
Number of successful extensions: 683
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)