Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_D12
         (885 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031030-1|AAH31030.1|  235|Homo sapiens Unknown (protein for IM...   181   3e-45
Z30093-1|CAA82909.1|  303|Homo sapiens basic transcription facto...   181   4e-45
BC065250-1|AAH65250.1|  308|Homo sapiens general transcription f...   181   4e-45
BC047868-1|AAH47868.2|  303|Homo sapiens GTF2H3 protein protein.      181   4e-45
BC039726-1|AAH39726.1|  303|Homo sapiens GTF2H3 protein protein.      181   4e-45
AF548661-1|AAN40702.1|  308|Homo sapiens general transcription f...   181   4e-45
AL832580-1|CAD89939.1|  615|Homo sapiens hypothetical protein pr...    30   9.7  

>BC031030-1|AAH31030.1|  235|Homo sapiens Unknown (protein for
           IMAGE:4724313) protein.
          Length = 235

 Score =  181 bits (441), Expect = 3e-45
 Identities = 77/112 (68%), Positives = 89/112 (79%)
 Frame = -3

Query: 868 MNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKIPSLEGLLQYLLWVFLPEANE 689
           MNV F AQK+ +LID C +D    LLQQ CDITGGLYLK+P +  LLQYLLWVFLP+ ++
Sbjct: 105 MNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQ 164

Query: 688 RSKLVLPGRGRVDYRAACFCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVF 533
           RS+L+LP    VDYRAACFCHR L+ IGYVCSVCLS+FC FSPICTTC T F
Sbjct: 165 RSRLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAF 216


>Z30093-1|CAA82909.1|  303|Homo sapiens basic transcription factor
           2, 35 kD subunit protein.
          Length = 303

 Score =  181 bits (440), Expect = 4e-45
 Identities = 77/112 (68%), Positives = 89/112 (79%)
 Frame = -3

Query: 868 MNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKIPSLEGLLQYLLWVFLPEANE 689
           MNV F AQK+ +LID C +D    LLQQ CDITGGLYLK+P +  LLQYLLWVFLP+ ++
Sbjct: 178 MNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQ 237

Query: 688 RSKLVLPGRGRVDYRAACFCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVF 533
           RS+L+LP    VDYRAACFCHR L+ IGYVCSVCLS+FC FSPICTTC T F
Sbjct: 238 RSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAF 289


>BC065250-1|AAH65250.1|  308|Homo sapiens general transcription
           factor IIH, polypeptide 3, 34kDa protein.
          Length = 308

 Score =  181 bits (440), Expect = 4e-45
 Identities = 77/112 (68%), Positives = 89/112 (79%)
 Frame = -3

Query: 868 MNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKIPSLEGLLQYLLWVFLPEANE 689
           MNV F AQK+ +LID C +D    LLQQ CDITGGLYLK+P +  LLQYLLWVFLP+ ++
Sbjct: 178 MNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQ 237

Query: 688 RSKLVLPGRGRVDYRAACFCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVF 533
           RS+L+LP    VDYRAACFCHR L+ IGYVCSVCLS+FC FSPICTTC T F
Sbjct: 238 RSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAF 289


>BC047868-1|AAH47868.2|  303|Homo sapiens GTF2H3 protein protein.
          Length = 303

 Score =  181 bits (440), Expect = 4e-45
 Identities = 77/112 (68%), Positives = 89/112 (79%)
 Frame = -3

Query: 868 MNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKIPSLEGLLQYLLWVFLPEANE 689
           MNV F AQK+ +LID C +D    LLQQ CDITGGLYLK+P +  LLQYLLWVFLP+ ++
Sbjct: 173 MNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQ 232

Query: 688 RSKLVLPGRGRVDYRAACFCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVF 533
           RS+L+LP    VDYRAACFCHR L+ IGYVCSVCLS+FC FSPICTTC T F
Sbjct: 233 RSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAF 284


>BC039726-1|AAH39726.1|  303|Homo sapiens GTF2H3 protein protein.
          Length = 303

 Score =  181 bits (440), Expect = 4e-45
 Identities = 77/112 (68%), Positives = 89/112 (79%)
 Frame = -3

Query: 868 MNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKIPSLEGLLQYLLWVFLPEANE 689
           MNV F AQK+ +LID C +D    LLQQ CDITGGLYLK+P +  LLQYLLWVFLP+ ++
Sbjct: 173 MNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQ 232

Query: 688 RSKLVLPGRGRVDYRAACFCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVF 533
           RS+L+LP    VDYRAACFCHR L+ IGYVCSVCLS+FC FSPICTTC T F
Sbjct: 233 RSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAF 284


>AF548661-1|AAN40702.1|  308|Homo sapiens general transcription
           factor IIH, polypeptide 3, 34kDa protein.
          Length = 308

 Score =  181 bits (440), Expect = 4e-45
 Identities = 77/112 (68%), Positives = 89/112 (79%)
 Frame = -3

Query: 868 MNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKIPSLEGLLQYLLWVFLPEANE 689
           MNV F AQK+ +LID C +D    LLQQ CDITGGLYLK+P +  LLQYLLWVFLP+ ++
Sbjct: 178 MNVIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQ 237

Query: 688 RSKLVLPGRGRVDYRAACFCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVF 533
           RS+L+LP    VDYRAACFCHR L+ IGYVCSVCLS+FC FSPICTTC T F
Sbjct: 238 RSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAF 289


>AL832580-1|CAD89939.1|  615|Homo sapiens hypothetical protein
           protein.
          Length = 615

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -3

Query: 604 YVCSVCLSVFCKFSP-ICTTCHTVF 533
           Y+C+VCL V+  F+P +C  CH +F
Sbjct: 453 YICAVCLDVY--FNPYMCYPCHHIF 475


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,252,423
Number of Sequences: 237096
Number of extensions: 2355383
Number of successful extensions: 8583
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8582
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)