Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_D12
         (885 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025234-1|ABF17925.1|  299|Drosophila melanogaster FI01003p pro...   188   7e-48
AE014134-209|AAF51411.2|  299|Drosophila melanogaster CG5041-PA ...   188   7e-48
AY071043-1|AAL48665.1|  299|Drosophila melanogaster RE13149p pro...   187   2e-47
AE013599-878|AAM71069.2| 2172|Drosophila melanogaster CG1884-PA,...    29   8.5  
AE013599-877|AAF58926.2| 2170|Drosophila melanogaster CG1884-PB,...    29   8.5  

>BT025234-1|ABF17925.1|  299|Drosophila melanogaster FI01003p
           protein.
          Length = 299

 Score =  188 bits (459), Expect = 7e-48
 Identities = 83/112 (74%), Positives = 94/112 (83%)
 Frame = -3

Query: 868 MNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKIPSLEGLLQYLLWVFLPEANE 689
           MNVFFTAQK  + ID C++DK LSLLQQGCDIT G +LK+  L+GLLQYLLWVFLP    
Sbjct: 168 MNVFFTAQKLGITIDTCALDKTLSLLQQGCDITSGQFLKVTQLDGLLQYLLWVFLPAPQI 227

Query: 688 RSKLVLPGRGRVDYRAACFCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVF 533
           R KLVLP   +VDYRA+CFCHREL+ IGYVCSVCLSVFCK+SPICTTCHT+F
Sbjct: 228 RHKLVLPPPPKVDYRASCFCHRELIDIGYVCSVCLSVFCKYSPICTTCHTIF 279


>AE014134-209|AAF51411.2|  299|Drosophila melanogaster CG5041-PA
           protein.
          Length = 299

 Score =  188 bits (459), Expect = 7e-48
 Identities = 83/112 (74%), Positives = 94/112 (83%)
 Frame = -3

Query: 868 MNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKIPSLEGLLQYLLWVFLPEANE 689
           MNVFFTAQK  + ID C++DK LSLLQQGCDIT G +LK+  L+GLLQYLLWVFLP    
Sbjct: 168 MNVFFTAQKLGITIDTCALDKTLSLLQQGCDITSGQFLKVTQLDGLLQYLLWVFLPAPQI 227

Query: 688 RSKLVLPGRGRVDYRAACFCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVF 533
           R KLVLP   +VDYRA+CFCHREL+ IGYVCSVCLSVFCK+SPICTTCHT+F
Sbjct: 228 RHKLVLPPPPKVDYRASCFCHRELIDIGYVCSVCLSVFCKYSPICTTCHTIF 279


>AY071043-1|AAL48665.1|  299|Drosophila melanogaster RE13149p
           protein.
          Length = 299

 Score =  187 bits (456), Expect = 2e-47
 Identities = 82/112 (73%), Positives = 94/112 (83%)
 Frame = -3

Query: 868 MNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKIPSLEGLLQYLLWVFLPEANE 689
           +NVFFTAQK  + ID C++DK LSLLQQGCDIT G +LK+  L+GLLQYLLWVFLP    
Sbjct: 168 LNVFFTAQKLGITIDTCALDKTLSLLQQGCDITSGQFLKVTQLDGLLQYLLWVFLPAPQI 227

Query: 688 RSKLVLPGRGRVDYRAACFCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVF 533
           R KLVLP   +VDYRA+CFCHREL+ IGYVCSVCLSVFCK+SPICTTCHT+F
Sbjct: 228 RHKLVLPPPPKVDYRASCFCHRELIDIGYVCSVCLSVFCKYSPICTTCHTIF 279


>AE013599-878|AAM71069.2| 2172|Drosophila melanogaster CG1884-PA,
            isoform A protein.
          Length = 2172

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
 Frame = +2

Query: 440  VLRAHEYLEQVKVNLNFHFLLLGF---DRWSSYFEDGVTRCTY--RAEFAENTQANRA 598
            ++  HE +EQ+K+  N H  +LG       +   E  VT+C +  R E   N +A RA
Sbjct: 1451 LVNMHENMEQMKMYQNIHLRILGLLNNSFGAPNTERAVTKCFFDIREEVRYNVEAARA 1508


>AE013599-877|AAF58926.2| 2170|Drosophila melanogaster CG1884-PB,
            isoform B protein.
          Length = 2170

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
 Frame = +2

Query: 440  VLRAHEYLEQVKVNLNFHFLLLGF---DRWSSYFEDGVTRCTY--RAEFAENTQANRA 598
            ++  HE +EQ+K+  N H  +LG       +   E  VT+C +  R E   N +A RA
Sbjct: 1451 LVNMHENMEQMKMYQNIHLRILGLLNNSFGAPNTERAVTKCFFDIREEVRYNVEAARA 1508


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,929,740
Number of Sequences: 53049
Number of extensions: 736299
Number of successful extensions: 1624
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1624
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)