Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_D11
         (772 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0677 + 10343089-10343604,10344316-10344462,10344539-103446...   145   3e-35
07_03_1773 - 29422660-29422806,29423103-29423201,29423811-294239...   144   9e-35
11_04_0192 - 14710848-14711165                                         34   0.14 
08_02_1260 - 25680618-25680677,25680763-25680893,25681085-256811...    30   1.8  
10_08_0789 + 20569738-20570207,20573425-20573464,20573484-205735...    30   2.4  

>03_02_0677 +
           10343089-10343604,10344316-10344462,10344539-10344643,
           10345411-10345509,10345662-10345814
          Length = 339

 Score =  145 bits (352), Expect = 3e-35
 Identities = 85/222 (38%), Positives = 126/222 (56%), Gaps = 20/222 (9%)
 Frame = -3

Query: 770 GYIDLSKXRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEELYKKTAWYFEE 591
           GYIDLSK RVS E+ + C +RY K+K V+SI+RHVAE L  +    LE LY++  W    
Sbjct: 81  GYIDLSKRRVSEEEAHACEDRYNKSKLVHSIMRHVAETLGID----LEPLYQRIGWPL-- 134

Query: 590 KYKKKASAYDFFKQAAVDP-SVLD-------ECGLD------------EETKDVLLANIK 471
            Y+K   A++ FK    DP ++LD       E G D             E KD L+ NI+
Sbjct: 135 -YRKYGHAFEAFKLIVADPDAILDSLTYEEKETGADGQEVTKVVPAVTPEVKDALVKNIR 193

Query: 470 RKLTSQAVKIRADIECACYGYEGIDAVRAALKAGLALSTVDMPIKINLIAPPLYVMTTST 291
           R++T Q +KIRAD+E  C+ ++G+  ++ A++   A    + P+KI L+APPLYV+TT T
Sbjct: 194 RRMTPQPLKIRADVEMKCFQFDGVLHIKQAMRKAEAAGNDNCPVKIKLVAPPLYVLTTQT 253

Query: 290 PEKTDGLKALQDAIDKIQENITEAGGVFNIQMAPKVVTATDE 165
            +K  G+  L DAI      I +  G   ++ AP+ V+  ++
Sbjct: 254 LDKDQGISVLTDAIKACTAEIEKHKGKLIVKEAPRAVSERED 295


>07_03_1773 -
           29422660-29422806,29423103-29423201,29423811-29423915,
           29423990-29424136,29424436-29424954
          Length = 338

 Score =  144 bits (348), Expect = 9e-35
 Identities = 88/232 (37%), Positives = 128/232 (55%), Gaps = 21/232 (9%)
 Frame = -3

Query: 770 GYIDLSKXRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEELYKKTAWYFEE 591
           GYIDLSK RVS  D   C +RY+K+K V+SI+RH+AE LH +    LE LY + AW    
Sbjct: 81  GYIDLSKRRVSHHDRRTCEDRYSKSKFVHSIMRHLAETLHLD----LEPLYHRIAWPL-- 134

Query: 590 KYKKKASAYDFFKQAAVDP--SVLD-------ECGLDE------------ETKDVLLANI 474
            Y+    A+D FK    DP  ++LD       E G D+            E KD L+ NI
Sbjct: 135 -YRTYGHAFDAFKLIVADPDAAILDSLTYDLTETGPDDQEVTKTLPAVTPEIKDALIKNI 193

Query: 473 KRKLTSQAVKIRADIECACYGYEGIDAVRAALKAGLALSTVDMPIKINLIAPPLYVMTTS 294
           +R++T Q  KIRADI+  C+ Y+G+  ++ A++   A    D P+KI L+A PLYV+TT 
Sbjct: 194 RRRMTPQPHKIRADIDMKCFQYDGVLHIQEAMRKAEAAGNKDCPVKIKLVAAPLYVLTTE 253

Query: 293 TPEKTDGLKALQDAIDKIQENITEAGGVFNIQMAPKVVTATDEAELARQMER 138
           T +K  G+  L +AI    E I +  G   ++ AP+ V+  ++      +E+
Sbjct: 254 TLDKHQGISVLNNAIKACGETIEKHKGKLVVKEAPRAVSEREDRLFMDDIEK 305


>11_04_0192 - 14710848-14711165
          Length = 105

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -2

Query: 267 SITRRNRQNSREHHRSRWSLQHSDGA*SGDSDRRGRVGPTDGTRGG*KR 121
           ++T RNR++ R   R  W  Q  + A +    RR   G  D +RGG +R
Sbjct: 8   ALTTRNRRSKRRSRRRSWRRQWEEEAAAEKRSRRTSPGGGDNSRGGGRR 56


>08_02_1260 -
           25680618-25680677,25680763-25680893,25681085-25681163,
           25681250-25681280,25681358-25681410,25681441-25681511,
           25681610-25681678,25681776-25681889,25683101-25683293
          Length = 266

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 8/20 (40%), Positives = 18/20 (90%)
 Frame = -3

Query: 608 AWYFEEKYKKKASAYDFFKQ 549
           AWY++E+Y+K+A  +D++++
Sbjct: 19  AWYWDERYRKEAGPFDWYQK 38


>10_08_0789 +
           20569738-20570207,20573425-20573464,20573484-20573536,
           20573633-20574212,20574323-20575384,20575631-20575813,
           20576112-20576199,20576285-20576532,20576712-20577053,
           20579026-20579163,20579521-20579547
          Length = 1076

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -3

Query: 365 ALSTVDMPIKINLIAPPLYVMTTSTPEKTDGLKALQDAIDKIQENITEA 219
           A+   D PI  +L+APP  V+T    E  D L + +  +D++Q    +A
Sbjct: 363 AVILYDCPIINDLLAPPSMVVTCCNEELVDVLMSQKITLDEVQLEAAKA 411


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,665,128
Number of Sequences: 37544
Number of extensions: 305636
Number of successful extensions: 913
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)