Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_D11
         (772 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC087079-10|AAK27873.2|  342|Caenorhabditis elegans Hypothetical...   221   3e-58
U56961-6|AAK39299.1|  497|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AL132858-15|CAB60482.3|  300|Caenorhabditis elegans Hypothetical...    29   4.8  
Z82274-8|CAB05230.3|  467|Caenorhabditis elegans Hypothetical pr...    28   8.5  
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>AC087079-10|AAK27873.2|  342|Caenorhabditis elegans Hypothetical
           protein Y37E3.10 protein.
          Length = 342

 Score =  221 bits (541), Expect = 3e-58
 Identities = 106/202 (52%), Positives = 146/202 (72%)
 Frame = -3

Query: 770 GYIDLSKXRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEELYKKTAWYFEE 591
           GYIDLSK RV  +D+ +C ER+A AK VNSILRHVAE + Y T E+LE+LY+KTAW+F+ 
Sbjct: 78  GYIDLSKRRVYQKDLKQCDERFANAKMVNSILRHVAEQVGYTTDEELEDLYQKTAWHFDR 137

Query: 590 KYKKKASAYDFFKQAAVDPSVLDECGLDEETKDVLLANIKRKLTSQAVKIRADIECACYG 411
           K K+KA++YD FK+A  +P++LDEC +  + K+ LL +I++KLT QAVKIRADIE +C+ 
Sbjct: 138 KEKRKAASYDAFKKAITEPTILDECDISADIKEKLLEDIRKKLTPQAVKIRADIEVSCFD 197

Query: 410 YEGIDAVRAALKAGLALSTVDMPIKINLIAPPLYVMTTSTPEKTDGLKALQDAIDKIQEN 231
           Y+GIDAV+AAL AG   S    PIKINLIA P +V+TT T ++  G++A+   +D I+  
Sbjct: 198 YDGIDAVKAALIAGKNCSNGTFPIKINLIAAPHFVVTTQTLDREGGIEAVNSILDTIKNA 257

Query: 230 ITEAGGVFNIQMAPKVVTATDE 165
           I    G F I+   ++VT  D+
Sbjct: 258 IEGFKGKFTIKEEARIVTDIDD 279


>U56961-6|AAK39299.1|  497|Caenorhabditis elegans Hypothetical
           protein T19D7.1 protein.
          Length = 497

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -1

Query: 682 RSCDM*QSSSIMKLLSNWKNFIK-KQLGTLKRNI 584
           R  D  +SS   KLL NWK F+K +++ +L RN+
Sbjct: 154 RKFDNSKSSCQKKLLKNWKIFLKIRKMLSLSRNV 187


>AL132858-15|CAB60482.3|  300|Caenorhabditis elegans Hypothetical
           protein Y113G7A.10 protein.
          Length = 300

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 624 FFQLLRSFIMEELCYMSQDRVYC-FRFCIAFCALVYI 731
           FFQ    FI++     ++ +  C + FCI FC  + I
Sbjct: 133 FFQFFERFILDNSELFNRLKAVCKYSFCIVFCVFITI 169


>Z82274-8|CAB05230.3|  467|Caenorhabditis elegans Hypothetical
           protein JC8.2 protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 7/92 (7%)
 Frame = -3

Query: 647 ETSEQLEELYKKTAWYFEEKYKKKASAYDFFKQAAV------DPSVLDECGLDEET-KDV 489
           E  ++  E  KK    + E  K +    D  K  A+      DP V ++   DEE  KD 
Sbjct: 71  EMKDEESEFEKKYMKGYNENIKDEPEGQDGMKGIAMYSTNKDDPYVTEQVDSDEEEEKDE 130

Query: 488 LLANIKRKLTSQAVKIRADIECACYGYEGIDA 393
           ++      + + A   + D    CY Y   D+
Sbjct: 131 IMVRKDDNMVAVAKIDKGDFTLECYVYNEADS 162


>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical
           protein C27B7.7 protein.
          Length = 1471

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -1

Query: 700 KRKQ*TRSCDM*QSSSIMKLLSNWKNFIKKQLGTLKRN 587
           +RK   R   M QSS+I+K L N + F K +L T + N
Sbjct: 2   RRKNFIRRFQMQQSSNILKHLENHEVFCKTELKTCQIN 39


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,265,056
Number of Sequences: 27780
Number of extensions: 271642
Number of successful extensions: 964
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)