SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_C22
         (859 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D83735-1|BAA12090.1|  309|Homo sapiens neutral calponin protein.       36   0.25 
CR541831-1|CAG46630.1|  309|Homo sapiens CNN2 protein.                 36   0.25 
CR541810-1|CAG46609.1|  309|Homo sapiens CNN2 protein.                 36   0.25 
BC141833-1|AAI41834.1|  309|Homo sapiens calponin 2 protein.           36   0.25 
BC141818-1|AAI41819.1|  309|Homo sapiens calponin 2 protein.           36   0.25 
AK222924-1|BAD96644.1|  309|Homo sapiens calponin 2 isoform a va...    36   0.25 
U59736-1|AAC50869.1|  812|Homo sapiens NFATc.b protein.                30   9.4  

>D83735-1|BAA12090.1|  309|Homo sapiens neutral calponin protein.
          Length = 309

 Score = 35.5 bits (78), Expect = 0.25
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -1

Query: 781 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYYGE 683
           CP GTV   G   GTG+C DP +VP    YY E
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYYQE 305


>CR541831-1|CAG46630.1|  309|Homo sapiens CNN2 protein.
          Length = 309

 Score = 35.5 bits (78), Expect = 0.25
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -1

Query: 781 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYYGE 683
           CP GTV   G   GTG+C DP +VP    YY E
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYYQE 305


>CR541810-1|CAG46609.1|  309|Homo sapiens CNN2 protein.
          Length = 309

 Score = 35.5 bits (78), Expect = 0.25
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -1

Query: 781 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYYGE 683
           CP GTV   G   GTG+C DP +VP    YY E
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYYQE 305


>BC141833-1|AAI41834.1|  309|Homo sapiens calponin 2 protein.
          Length = 309

 Score = 35.5 bits (78), Expect = 0.25
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -1

Query: 781 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYYGE 683
           CP GTV   G   GTG+C DP +VP    YY E
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYYQE 305


>BC141818-1|AAI41819.1|  309|Homo sapiens calponin 2 protein.
          Length = 309

 Score = 35.5 bits (78), Expect = 0.25
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -1

Query: 781 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYYGE 683
           CP GTV   G   GTG+C DP +VP    YY E
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYYQE 305


>AK222924-1|BAD96644.1|  309|Homo sapiens calponin 2 isoform a
           variant protein.
          Length = 309

 Score = 35.5 bits (78), Expect = 0.25
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -1

Query: 781 CPIGTVFKIGDADGTGNCEDPEDVPGCEDYYGE 683
           CP GTV   G   GTG+C DP +VP    YY E
Sbjct: 274 CPQGTVAD-GAPSGTGDCPDPGEVPEYPPYYQE 305


>U59736-1|AAC50869.1|  812|Homo sapiens NFATc.b protein.
          Length = 812

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = -2

Query: 807 SRALPASTVAPSEPFSRSETPTALVTAK--TPKTFPDARTTMENWI*RRSARVSSSPGSR 634
           S  +   T  P E F R      L+++   +P T P A  T E+W+  RS+R +S    R
Sbjct: 194 SPCVSPKTTDPEEGFPRGLGACTLLSSPRHSPSTSPRASVTEESWLGARSSRPASPCNKR 253


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,840,610
Number of Sequences: 237096
Number of extensions: 2234474
Number of successful extensions: 6376
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6355
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -