Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_C20
         (728 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    25   0.97 
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    25   0.97 
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    25   0.97 
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    25   0.97 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.0  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
          channel variant 4 protein.
          Length = 489

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 30 SSLLSLFFVTLAPAVLFLLLC 92
          SS+LSL   +LA +++F +LC
Sbjct: 17 SSVLSLSLTSLASSLIFTILC 37


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
          channel variant 3 protein.
          Length = 475

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 30 SSLLSLFFVTLAPAVLFLLLC 92
          SS+LSL   +LA +++F +LC
Sbjct: 17 SSVLSLSLTSLASSLIFTILC 37


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
          channel variant 1 protein.
          Length = 509

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 30 SSLLSLFFVTLAPAVLFLLLC 92
          SS+LSL   +LA +++F +LC
Sbjct: 17 SSVLSLSLTSLASSLIFTILC 37


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
          channel protein.
          Length = 458

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 30 SSLLSLFFVTLAPAVLFLLLC 92
          SS+LSL   +LA +++F +LC
Sbjct: 17 SSVLSLSLTSLASSLIFTILC 37


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 3   PSPPPAVGPSSLLSL 47
           PSP P VGP   LSL
Sbjct: 884 PSPRPLVGPCKALSL 898



 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 419 AVIMIDGSTTLTYSSRGPMLMPDVNPNP 502
           A I++    T  Y++  P L   +NPNP
Sbjct: 198 APILVRARETPNYTACPPTLACPLNPNP 225



 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 3   PSPPPAVGPSSLLSLFFVTLAPAV 74
           P+P P  G   LL  F    +PA+
Sbjct: 223 PNPQPLTGQQELLQDFSKRFSPAI 246


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 5/29 (17%)
 Frame = +2

Query: 395 IPGXVPS-----RAVIMIDGSTTLTYSSR 466
           +P  VPS     R V+  DGS T  YSS+
Sbjct: 566 VPDEVPSDVLYNRLVVSEDGSETFKYSSQ 594


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 5/29 (17%)
 Frame = +2

Query: 395 IPGXVPS-----RAVIMIDGSTTLTYSSR 466
           +P  VPS     R V+  DGS T  YSS+
Sbjct: 566 VPDEVPSDVLYNRLVVSEDGSETFKYSSQ 594


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 464 RGPMLMPDVNPN 499
           RGPM   D NPN
Sbjct: 856 RGPMTNDDFNPN 867


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,518
Number of Sequences: 438
Number of extensions: 3723
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)