Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_C13
         (347 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   1.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   1.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   3.2  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   5.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   5.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               20   7.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   7.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   9.6  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +2

Query: 287 SLIITSTYTIVCLRSPK 337
           ++ +++T T+VCL SPK
Sbjct: 743 AISLSATVTLVCLYSPK 759


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +2

Query: 287 SLIITSTYTIVCLRSPK 337
           ++ +++T T+VCL SPK
Sbjct: 833 AISLSATVTLVCLYSPK 849


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 125 RLHR**APT*QYFAQRLQWIY 63
           RLH    P  +Y+ +R +W+Y
Sbjct: 712 RLHYETDPCVRYYPRRKEWLY 732


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 214 FKSNNVTNAVSWRTPAAQ 161
           F  N +T  V WR P+ Q
Sbjct: 48  FVGNIITCIVIWRNPSMQ 65


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 281 NTSLIITSTYTIVCLRSPK 337
           + ++ ++++ TI CL SPK
Sbjct: 883 SVTISLSASVTIACLFSPK 901


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 5/17 (29%), Positives = 10/17 (58%)
 Frame = -3

Query: 51  IIFFCHLNLNYTXNKIN 1
           ++F CH  +N+    +N
Sbjct: 804 VVFVCHNGMNWMPTHLN 820


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 115 RCSLYTSGSPPPTPLXVR 168
           RC L T    PP PL  R
Sbjct: 402 RCLLETLRMYPPVPLIAR 419


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +1

Query: 259 TSPPRGPQHFAYNY 300
           T PP  PQ+   N+
Sbjct: 315 TQPPSAPQNLTVNF 328


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,973
Number of Sequences: 438
Number of extensions: 1507
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)