Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_C11
         (794 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_05_0081 - 18924353-18924462,18925068-18925187,18925569-189260...    29   3.2  
02_05_0803 - 31842722-31843648                                         29   3.2  
09_04_0254 + 16131779-16132475,16132609-16132768,16132944-161329...    29   5.6  
06_01_1106 + 9111560-9112942                                           29   5.6  
11_06_0562 + 25003246-25003746,25004975-25005214,25005576-250060...    28   9.8  
01_06_0414 + 29182350-29183812,29184211-29184346                       28   9.8  

>11_05_0081 -
           18924353-18924462,18925068-18925187,18925569-18926086,
           18927392-18927471,18927680-18927782,18928084-18928295,
           18928392-18929210,18929331-18929444,18929935-18929983,
           18930115-18930271,18930354-18930807,18930938-18931147
          Length = 981

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 201 NSLFWYKTFFYSHHFMYYIYKVVIVNHLYV 112
           N L  +  F+YSHH    +Y ++IV+  Y+
Sbjct: 562 NRLTGFNAFWYSHHCFVIVYALLIVHGYYL 591


>02_05_0803 - 31842722-31843648
          Length = 308

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/60 (25%), Positives = 26/60 (43%)
 Frame = +2

Query: 521 LVSVMSSSNGFLRIVATEGNGVFVGWISSRCRSSLQITLQNDTGDWVGETVEEAPWWTGW 700
           L + + +  G + +V T+ +    G+ SSRC           T  WVG + ++ P    W
Sbjct: 135 LAARVGTKRGGVALVFTDEDVTVEGFCSSRCGKHGSDASAGTTHIWVGNSAKQCPGQCAW 194


>09_04_0254 +
           16131779-16132475,16132609-16132768,16132944-16132992,
           16133158-16133271,16133434-16133958,16135538-16135969,
           16138882-16138956,16139530-16139625,16140610-16140725,
           16140822-16140992,16141080-16141239,16141328-16141513,
           16141624-16141752,16141837-16141915,16142034-16142143
          Length = 1032

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -3

Query: 204 YNSLFWYKTFFYSHHFMYYIYKVVIVNHLYVL 109
           +N L  +  F+YSHH +  +Y ++I  H Y L
Sbjct: 619 FNRLAGFNAFWYSHHLLGIVYALLIA-HGYFL 649


>06_01_1106 + 9111560-9112942
          Length = 460

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2

Query: 754 PGQGFTGKPLNEKYEEPEPTGP 689
           PG   T   LN   +EPEPTGP
Sbjct: 168 PGLRLTRADLNPPIDEPEPTGP 189


>11_06_0562 + 25003246-25003746,25004975-25005214,25005576-25006097,
            25006184-25007248,25007350-25007656,25007761-25008001,
            25008104-25008302,25008771-25008852,25008959-25009209,
            25010061-25010219,25010220-25010603
          Length = 1316

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = +2

Query: 512  HLSLVSVMSSSNGFLRIVATEGNGVFVGWISSRCRSSLQITLQNDTGDWVGE 667
            +L+ VS + +S+  + I    G+GV +  +  R + ++ ++LQN  G  VGE
Sbjct: 1250 YLNPVSSLQASHAVMII----GSGVTMTKVKKRIQCAIHLSLQNSAGRLVGE 1297


>01_06_0414 + 29182350-29183812,29184211-29184346
          Length = 532

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 503 FQNHLSLVSVMSSSNGFLRIVATEGNGVFVGWISSR 610
           F  +L    ++++S G   I++  G G+   W+SSR
Sbjct: 286 FDVNLQTAGLIAASFGMANIISRPGGGLLSDWLSSR 321


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,705,105
Number of Sequences: 37544
Number of extensions: 369966
Number of successful extensions: 854
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)