Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_C09
(640 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 33 0.035
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 32 0.080
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 32 0.080
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 30 0.25
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 29 0.75
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 28 0.99
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 1.7
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 27 3.0
SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces pombe... 26 4.0
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 26 4.0
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 4.0
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 26 5.3
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 5.3
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 25 7.0
SPBC83.16c |||conserved fungal protein|Schizosaccharomyces pombe... 25 7.0
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 25 7.0
SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 25 7.0
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 25 9.2
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 33.1 bits (72), Expect = 0.035
Identities = 17/57 (29%), Positives = 35/57 (61%)
Frame = -2
Query: 498 PEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMRE 328
P + D E ++LE D S+L+ L+R+N+++ +QLK + NI++++++ E
Sbjct: 627 PAKHSRVDRYEHPKVLEDN-DSTISSLESLKRENEELREQLKVEHEENISMQKQLSE 682
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 31.9 bits (69), Expect = 0.080
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Frame = -2
Query: 495 EDDNNEDITEEYEL--LESTLDELNSALD----FLERKNDDI---HQQLKELLQSNIAIR 343
ED +N+++ EYE+ L++ LDEL+ LD L K D+I +Q++E S+ A
Sbjct: 274 EDKSNKEVDYEYEIRQLQNRLDELSEELDVAQDLLTEKEDEIATLKRQIEEKENSSSAFE 333
Query: 342 QE 337
E
Sbjct: 334 NE 335
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 31.9 bits (69), Expect = 0.080
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -2
Query: 486 NNEDITE-EYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVS 310
NNE + E E+L + +DELNS LE + + + L + ++++E + +S
Sbjct: 20 NNEGLDGIEQEILAAGIDELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEKIKENQEKIS 79
Query: 309 NS 304
N+
Sbjct: 80 NN 81
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 30.3 bits (65), Expect = 0.25
Identities = 13/61 (21%), Positives = 33/61 (54%)
Frame = -2
Query: 468 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN*RNA 289
E+ + +++++E+ + L+ + + + Q+K LL+ N ++++ + D N NA
Sbjct: 308 EKLSIAQNSINEIQTQNRDLKLETEKLQDQIKALLERNQSLQEALETVKNDEKNLREMNA 367
Query: 288 N 286
N
Sbjct: 368 N 368
Score = 25.4 bits (53), Expect = 7.0
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = -2
Query: 432 LNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN 301
L S + E + +H L+ L Q+N +++ E+ E+N ++++ N
Sbjct: 520 LKSQIRDQELTIEKLHDSLETLSQTNNSLQCEISEKNAELNSVN 563
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 28.7 bits (61), Expect = 0.75
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = -2
Query: 480 EDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSN 307
+D EE+ L LD++ + + KN D+ +L++ N ++ + +NK + N
Sbjct: 701 KDFIEEHSKLTKQLDDIKNQFGIISSKNRDLLSELEKSKSLNNSL-AALESKNKKLEN 757
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 28.3 bits (60), Expect = 0.99
Identities = 12/50 (24%), Positives = 25/50 (50%)
Frame = -2
Query: 477 DITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMRE 328
+ TE+ + + + LER+ DD+ Q+L+E+ ++ E+ E
Sbjct: 104 ETTEKMRQTDVKAEHFERRVQSLERERDDMEQKLEEMTDKYTKVKAELDE 153
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.5 bits (58), Expect = 1.7
Identities = 14/54 (25%), Positives = 32/54 (59%)
Frame = -2
Query: 468 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSN 307
++++L + +D+L D LE+ ++ ++ + L QSN + + + EE D++N
Sbjct: 1127 KQHDLCANFVDDLKEKSDALEQLTNEKNELIVSLEQSN-SNNEALVEERSDLAN 1179
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 408 ERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN 301
+R+N Q +++L +SN+ + + E K SNSN
Sbjct: 550 KRRNSGTEQVVRQLSKSNVEVIGKGGERKKVASNSN 585
>SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 882
Score = 26.2 bits (55), Expect = 4.0
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = -2
Query: 471 TEEYE-LLESTLDELNSALDFLERKNDDIHQQLKE 370
T+ YE L+ +LD +++ F+++ DDI + LKE
Sbjct: 844 TKLYERALQQSLDTISANSSFIDKSLDDITRWLKE 878
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 26.2 bits (55), Expect = 4.0
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -2
Query: 480 EDITEEYELLESTLDELNSALDFLERKN---DDIHQQLKELLQSNIAIRQEMRE 328
E TEE EL + +N+ FL+++N D + + EL + N A E+ +
Sbjct: 2 EKDTEELELENAVFGNINNFSSFLDKENETFDVMMNEAPELSEDNDAQEDELEK 55
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 26.2 bits (55), Expect = 4.0
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2
Query: 453 LESTLDELNSALDFLERKNDDIHQQLKE 370
L T ELNSALD +++ +IH +LKE
Sbjct: 1346 LVDTRKELNSALDSCKKREAEIH-RLKE 1372
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 25.8 bits (54), Expect = 5.3
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = -2
Query: 468 EEYELLESTLDELNSALDF-LE--RKNDDIHQQLKELLQSNIA-IRQEMREENKDVSN 307
EEYE L S D+LNS L F L+ +N + Q K+ L S + + +++ ++ VS+
Sbjct: 381 EEYEGLRSEADKLNSNLLFKLQTLNRNIKVTSQSKDSLTSIVGDLESKIKSLHESVSS 438
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.8 bits (54), Expect = 5.3
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -2
Query: 474 ITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIA-IRQEMREENKDVSNSN* 298
+ EE E L+ +++ N+ L ++ + LK+ + A ++QE+ +NK++++ N
Sbjct: 1392 LNEEVENLKKEVEQANTKNTRLAAAWNEKCENLKKSSLTRFAHLKQELTNKNKELTSKNA 1451
Query: 297 RN 292
N
Sbjct: 1452 EN 1453
Score = 25.0 bits (52), Expect = 9.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 459 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQE 337
EL +S + + A + ++ H+Q K L++S I+ R+E
Sbjct: 963 ELEKSNIQQKYLASEKTLEMMNETHEQFKHLVESEISTREE 1003
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 25.4 bits (53), Expect = 7.0
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -2
Query: 501 PPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKEL-LQSNIAIRQEMREE 325
PP NN+ T++ LLES N + L D++++ E ++S+ + + E
Sbjct: 162 PPWIGNNDHATDKENLLESDASSSNDSESELTDSADNMNESDSESEIESSDSDHDD--GE 219
Query: 324 NKDVSNSN*RN 292
N D N RN
Sbjct: 220 NSDSKLDNLRN 230
>SPBC83.16c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 563
Score = 25.4 bits (53), Expect = 7.0
Identities = 11/50 (22%), Positives = 26/50 (52%)
Frame = -3
Query: 407 SVKMMIFTNN*KSFCNPILQLDKKCVKKIRTSATVIEEMQIQHYFKFNCA 258
S+ +M+ + FC+ + K V K+R + ++ ++ +H+ F+ A
Sbjct: 103 SIGLMLLLSALIGFCSESIVTSVKSVYKLRKAHSIFSKINKRHFDHFSAA 152
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 25.4 bits (53), Expect = 7.0
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -2
Query: 432 LNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSN 307
+++ L+ LE DD + +LKE NIA +QE+ ++S+
Sbjct: 433 VDAYLNPLEFNFDDKNVKLKEFGSPNIAYKQELNSFQGELSS 474
>SPCC338.07c |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 729
Score = 25.4 bits (53), Expect = 7.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 465 EYELLESTLDELNSALDFLERKNDDIHQ 382
EYEL S ++E S + L +N D HQ
Sbjct: 230 EYELYLSKMEEAKSTIYLLLDRNPDNHQ 257
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 25.0 bits (52), Expect = 9.2
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Frame = -3
Query: 395 MIFTNN*KSFCNPILQLDKK-CV--KKIRTSATVIEEM 291
++ ++N K+F NP++ L +K CV +K+ TV ++M
Sbjct: 202 LLHSSNLKAFINPLIPLTQKFCVQLQKLFADLTVSDQM 239
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,089,539
Number of Sequences: 5004
Number of extensions: 36335
Number of successful extensions: 129
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 285732116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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