BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_C08
(756 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 24 1.8
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 24 1.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 24 1.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 24 1.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 24 1.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 24 1.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 24 1.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 24 1.8
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 23 2.3
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 4.1
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 5.4
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +3
Query: 99 DFTYCXYNHFFFKLNYTTYRTAHFYFNMI 185
++ Y YN++ NY Y+ ++ N I
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +3
Query: 99 DFTYCXYNHFFFKLNYTTYRTAHFYFNMI 185
++ Y YN++ NY Y+ ++ N I
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +3
Query: 99 DFTYCXYNHFFFKLNYTTYRTAHFYFNMI 185
++ Y YN++ NY Y+ ++ N I
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +3
Query: 99 DFTYCXYNHFFFKLNYTTYRTAHFYFNMI 185
++ Y YN++ NY Y+ ++ N I
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +3
Query: 99 DFTYCXYNHFFFKLNYTTYRTAHFYFNMI 185
++ Y YN++ NY Y+ ++ N I
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +3
Query: 99 DFTYCXYNHFFFKLNYTTYRTAHFYFNMI 185
++ Y YN++ NY Y+ ++ N I
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +3
Query: 99 DFTYCXYNHFFFKLNYTTYRTAHFYFNMI 185
++ Y YN++ NY Y+ ++ N I
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +3
Query: 99 DFTYCXYNHFFFKLNYTTYRTAHFYFNMI 185
++ Y YN++ NY Y+ ++ N I
Sbjct: 88 NYNYSNYNNYNNNNNYNNYKKLYYNINYI 116
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/30 (33%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = -2
Query: 380 QKKPNTYLMLISHKYVKYS--DKKKHQVNF 297
+++ N Y+ ++S+KY K + D ++VNF
Sbjct: 366 ERQNNEYIWIVSNKYQKIANGDLNFNEVNF 395
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 117 YNHFFFKLNYTTYRTAHFYFNMI 185
YN+ +K NY Y +Y N I
Sbjct: 324 YNNNNYKYNYNNYNKKLYYKNYI 346
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 659 VLFE*FPAAVLHGSD 703
VLFE FP ++ GSD
Sbjct: 207 VLFEIFPFCIVFGSD 221
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,285
Number of Sequences: 438
Number of extensions: 3295
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -