Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_C06
         (478 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p pro...   164   5e-41
AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC...   164   5e-41
Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal prot...   161   4e-40
U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal prot...   161   4e-40
AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p pro...   161   4e-40
AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB...   161   4e-40
AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA...   161   4e-40
X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal prot...   157   5e-39
BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p pro...    38   0.005
BT024209-1|ABC86271.1|  480|Drosophila melanogaster RE32713p pro...    27   9.9  
AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p pro...    27   9.9  
AY069273-1|AAL39418.1|  421|Drosophila melanogaster GM10003p pro...    27   9.9  
AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3 ...    27   9.9  
AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,...    27   9.9  
AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,...    27   9.9  

>BT011442-1|AAR99100.1|  147|Drosophila melanogaster RE59709p
           protein.
          Length = 147

 Score =  164 bits (399), Expect = 5e-41
 Identities = 73/89 (82%), Positives = 78/89 (87%)
 Frame = -3

Query: 392 YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 213
           +KM IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIG
Sbjct: 12  FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71

Query: 212 YGSNKKTRHMLPNGFRKXLVHNVKELERL 126
           YGSNK+TRHMLP GF+K LVHNV+ELE L
Sbjct: 72  YGSNKRTRHMLPTGFKKFLVHNVRELEVL 100



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 28/42 (66%), Positives = 31/42 (73%)
 Frame = -1

Query: 127 LMMQNRKYCAESAHGGXSKKRKLSVERAQQLSXRVTNAAARL 2
           L+MQNR YC E AHG  SKKRK  VERA+QLS R+TN   RL
Sbjct: 100 LLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRL 141


>AE014297-4525|AAN14210.1|  147|Drosophila melanogaster CG7939-PC,
           isoform C protein.
          Length = 147

 Score =  164 bits (399), Expect = 5e-41
 Identities = 73/89 (82%), Positives = 78/89 (87%)
 Frame = -3

Query: 392 YKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIG 213
           +KM IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIG
Sbjct: 12  FKMTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIG 71

Query: 212 YGSNKKTRHMLPNGFRKXLVHNVKELERL 126
           YGSNK+TRHMLP GF+K LVHNV+ELE L
Sbjct: 72  YGSNKRTRHMLPTGFKKFLVHNVRELEVL 100



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 28/42 (66%), Positives = 31/42 (73%)
 Frame = -1

Query: 127 LMMQNRKYCAESAHGGXSKKRKLSVERAQQLSXRVTNAAARL 2
           L+MQNR YC E AHG  SKKRK  VERA+QLS R+TN   RL
Sbjct: 100 LLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRL 141


>Y13939-1|CAA74278.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  161 bits (391), Expect = 4e-40
 Identities = 72/87 (82%), Positives = 76/87 (87%)
 Frame = -3

Query: 386 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 207
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 206 SNKKTRHMLPNGFRKXLVHNVKELERL 126
           SNK+TRHMLP GF+K LVHNV+ELE L
Sbjct: 61  SNKRTRHMLPTGFKKFLVHNVRELEVL 87



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 28/42 (66%), Positives = 31/42 (73%)
 Frame = -1

Query: 127 LMMQNRKYCAESAHGGXSKKRKLSVERAQQLSXRVTNAAARL 2
           L+MQNR YC E AHG  SKKRK  VERA+QLS R+TN   RL
Sbjct: 87  LLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRL 128


>U92431-1|AAB51389.1|  134|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 134

 Score =  161 bits (391), Expect = 4e-40
 Identities = 72/87 (82%), Positives = 76/87 (87%)
 Frame = -3

Query: 386 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 207
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 206 SNKKTRHMLPNGFRKXLVHNVKELERL 126
           SNK+TRHMLP GF+K LVHNV+ELE L
Sbjct: 61  SNKRTRHMLPTGFKKFLVHNVRELEVL 87



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 28/42 (66%), Positives = 31/42 (73%)
 Frame = -1

Query: 127 LMMQNRKYCAESAHGGXSKKRKLSVERAQQLSXRVTNAAARL 2
           L+MQNR YC E AHG  SKKRK  VERA+QLS R+TN   RL
Sbjct: 87  LLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRL 128


>AY070656-1|AAL48127.1|  134|Drosophila melanogaster RH03940p
           protein.
          Length = 134

 Score =  161 bits (391), Expect = 4e-40
 Identities = 72/87 (82%), Positives = 76/87 (87%)
 Frame = -3

Query: 386 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 207
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 206 SNKKTRHMLPNGFRKXLVHNVKELERL 126
           SNK+TRHMLP GF+K LVHNV+ELE L
Sbjct: 61  SNKRTRHMLPTGFKKFLVHNVRELEVL 87



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 28/42 (66%), Positives = 31/42 (73%)
 Frame = -1

Query: 127 LMMQNRKYCAESAHGGXSKKRKLSVERAQQLSXRVTNAAARL 2
           L+MQNR YC E AHG  SKKRK  VERA+QLS R+TN   RL
Sbjct: 87  LLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRL 128


>AE014297-4527|AAN14211.1|  134|Drosophila melanogaster CG7939-PB,
           isoform B protein.
          Length = 134

 Score =  161 bits (391), Expect = 4e-40
 Identities = 72/87 (82%), Positives = 76/87 (87%)
 Frame = -3

Query: 386 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 207
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 206 SNKKTRHMLPNGFRKXLVHNVKELERL 126
           SNK+TRHMLP GF+K LVHNV+ELE L
Sbjct: 61  SNKRTRHMLPTGFKKFLVHNVRELEVL 87



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 28/42 (66%), Positives = 31/42 (73%)
 Frame = -1

Query: 127 LMMQNRKYCAESAHGGXSKKRKLSVERAQQLSXRVTNAAARL 2
           L+MQNR YC E AHG  SKKRK  VERA+QLS R+TN   RL
Sbjct: 87  LLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRL 128


>AE014297-4526|AAF57001.1|  134|Drosophila melanogaster CG7939-PA,
           isoform A protein.
          Length = 134

 Score =  161 bits (391), Expect = 4e-40
 Identities = 72/87 (82%), Positives = 76/87 (87%)
 Frame = -3

Query: 386 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 207
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKHFIRHQSDRYAKLSHKWRKPKGIDNRVRRRFKGQYLMPNIGYG 60

Query: 206 SNKKTRHMLPNGFRKXLVHNVKELERL 126
           SNK+TRHMLP GF+K LVHNV+ELE L
Sbjct: 61  SNKRTRHMLPTGFKKFLVHNVRELEVL 87



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 28/42 (66%), Positives = 31/42 (73%)
 Frame = -1

Query: 127 LMMQNRKYCAESAHGGXSKKRKLSVERAQQLSXRVTNAAARL 2
           L+MQNR YC E AHG  SKKRK  VERA+QLS R+TN   RL
Sbjct: 87  LLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRL 128


>X00848-1|CAA25404.1|  133|Drosophila melanogaster ribosomal protein
           49 protein.
          Length = 133

 Score =  157 bits (382), Expect = 5e-39
 Identities = 71/87 (81%), Positives = 75/87 (86%)
 Frame = -3

Query: 386 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 207
           M IRP YRP IVKKRTK FIRHQSDRY KL   WRKP+GIDNRV RRFKGQYLMPNIGYG
Sbjct: 1   MTIRPAYRPKIVKKRTKDFIRHQSDRYAKLSHKWRKPKGIDNRVGRRFKGQYLMPNIGYG 60

Query: 206 SNKKTRHMLPNGFRKXLVHNVKELERL 126
           SNK+TRHMLP GF+K LVHNV+ELE L
Sbjct: 61  SNKRTRHMLPTGFKKFLVHNVRELEVL 87


>BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p
           protein.
          Length = 126

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 21/46 (45%), Positives = 26/46 (56%)
 Frame = -2

Query: 270 Y*QQSPQAVQGSILDAQHWLRFQQEDPSYAPKWIP*GPSXQC*RAG 133
           Y QQS   +QG++ DAQH LR +Q  P +A   I   P  Q  RAG
Sbjct: 7   YRQQSASPLQGTVSDAQHRLRIEQAHPPHAAHRIQEVPGAQRARAG 52


>BT024209-1|ABC86271.1|  480|Drosophila melanogaster RE32713p
           protein.
          Length = 480

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 452 FPFSCGRVTAWFTVAFLKETYKMAIRPVYRPTIVKKRTKRFI 327
           F +     + WF VAF  E +   I P+ R T+   R  + +
Sbjct: 137 FSYLASFCSVWFVVAFTVERFIAVINPLKRQTMCTVRRAKIV 178


>AY113651-1|AAM29656.1| 1019|Drosophila melanogaster SD13650p
           protein.
          Length = 1019

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 395 TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 282
           T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 841 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 878


>AY069273-1|AAL39418.1|  421|Drosophila melanogaster GM10003p
           protein.
          Length = 421

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 395 TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 282
           T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 243 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 280


>AL021106-10|CAA15944.1| 2422|Drosophila melanogaster EG:63B12.3
            protein.
          Length = 2422

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 395  TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 282
            T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 2244 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2281


>AE014298-281|AAN09063.2| 2431|Drosophila melanogaster CG3848-PD,
            isoform D protein.
          Length = 2431

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 395  TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 282
            T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 2253 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2290


>AE014298-280|AAF45684.2| 2410|Drosophila melanogaster CG3848-PC,
            isoform C protein.
          Length = 2410

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 395  TYKMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWR 282
            T +MA        +    +K+F+  +S +Y K+K+ WR
Sbjct: 2232 TQRMANSAAIAGEVACPYSKQFVHSKSSQYKKMKQEWR 2269


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,398,721
Number of Sequences: 53049
Number of extensions: 375280
Number of successful extensions: 1102
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)