Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_C01
(781 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X74104-1|CAA52207.1| 183|Homo sapiens translocon-associated pro... 159 1e-38
D37991-1|BAA07206.1| 183|Homo sapiens beta-signal sequence rece... 159 1e-38
CR456973-1|CAG33254.1| 183|Homo sapiens SSR2 protein. 159 1e-38
BC000341-1|AAH00341.2| 183|Homo sapiens signal sequence recepto... 159 1e-38
AL355388-11|CAH72631.1| 202|Homo sapiens signal sequence recept... 159 1e-38
AK222600-1|BAD96320.1| 183|Homo sapiens signal sequence recepto... 157 3e-38
BX649192-1|CAE46211.1| 143|Homo sapiens hypothetical protein pr... 97 8e-20
AL355388-12|CAH72632.1| 146|Homo sapiens signal sequence recept... 97 8e-20
L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p... 30 8.1
D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhance... 30 8.1
BC029653-1|AAH29653.1| 886|Homo sapiens ZFHX3 protein protein. 30 8.1
AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein. 30 8.1
>X74104-1|CAA52207.1| 183|Homo sapiens translocon-associated
protein protein.
Length = 183
Score = 159 bits (385), Expect = 1e-38
Identities = 73/139 (52%), Positives = 99/139 (71%)
Frame = -3
Query: 779 KYLVEXMDILVKYTLFNVGSAPAVEVKLVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSH 600
+Y VE D+ ++Y ++NVGS+ A++V+L D+ F P+ F +V G L + DRIAP +NVSH
Sbjct: 32 RYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSH 91
Query: 599 VVTVRSNKYGYFNFSSAEVTYKASEDATDVQYSISSAPGEGAIVAFKDYDRKFSSHILDW 420
V +R K GYFNF+SA +TY A ED V +SAPG+G I+A +++DR+FS H LDW
Sbjct: 92 TVVLRPLKAGYFNFTSATITYLAQEDG-PVVIGSTSAPGQGGILAQREFDRRFSPHFLDW 150
Query: 419 AAFAVMTLPSLAIPFGLWY 363
AAF VMTLPS+ IP LWY
Sbjct: 151 AAFGVMTLPSIGIPLLLWY 169
>D37991-1|BAA07206.1| 183|Homo sapiens beta-signal sequence
receptor protein.
Length = 183
Score = 159 bits (385), Expect = 1e-38
Identities = 73/139 (52%), Positives = 99/139 (71%)
Frame = -3
Query: 779 KYLVEXMDILVKYTLFNVGSAPAVEVKLVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSH 600
+Y VE D+ ++Y ++NVGS+ A++V+L D+ F P+ F +V G L + DRIAP +NVSH
Sbjct: 32 RYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSH 91
Query: 599 VVTVRSNKYGYFNFSSAEVTYKASEDATDVQYSISSAPGEGAIVAFKDYDRKFSSHILDW 420
V +R K GYFNF+SA +TY A ED V +SAPG+G I+A +++DR+FS H LDW
Sbjct: 92 TVVLRPLKAGYFNFTSATITYLAQEDG-PVVIGSTSAPGQGGILAQREFDRRFSPHFLDW 150
Query: 419 AAFAVMTLPSLAIPFGLWY 363
AAF VMTLPS+ IP LWY
Sbjct: 151 AAFGVMTLPSIGIPLLLWY 169
>CR456973-1|CAG33254.1| 183|Homo sapiens SSR2 protein.
Length = 183
Score = 159 bits (385), Expect = 1e-38
Identities = 73/139 (52%), Positives = 99/139 (71%)
Frame = -3
Query: 779 KYLVEXMDILVKYTLFNVGSAPAVEVKLVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSH 600
+Y VE D+ ++Y ++NVGS+ A++V+L D+ F P+ F +V G L + DRIAP +NVSH
Sbjct: 32 RYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSH 91
Query: 599 VVTVRSNKYGYFNFSSAEVTYKASEDATDVQYSISSAPGEGAIVAFKDYDRKFSSHILDW 420
V +R K GYFNF+SA +TY A ED V +SAPG+G I+A +++DR+FS H LDW
Sbjct: 92 TVVLRPLKAGYFNFTSATITYLAQEDG-PVVIGSTSAPGQGGILAQREFDRRFSPHFLDW 150
Query: 419 AAFAVMTLPSLAIPFGLWY 363
AAF VMTLPS+ IP LWY
Sbjct: 151 AAFGVMTLPSIGIPLLLWY 169
>BC000341-1|AAH00341.2| 183|Homo sapiens signal sequence receptor,
beta (translocon-associated protein beta) protein.
Length = 183
Score = 159 bits (385), Expect = 1e-38
Identities = 73/139 (52%), Positives = 99/139 (71%)
Frame = -3
Query: 779 KYLVEXMDILVKYTLFNVGSAPAVEVKLVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSH 600
+Y VE D+ ++Y ++NVGS+ A++V+L D+ F P+ F +V G L + DRIAP +NVSH
Sbjct: 32 RYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSH 91
Query: 599 VVTVRSNKYGYFNFSSAEVTYKASEDATDVQYSISSAPGEGAIVAFKDYDRKFSSHILDW 420
V +R K GYFNF+SA +TY A ED V +SAPG+G I+A +++DR+FS H LDW
Sbjct: 92 TVVLRPLKAGYFNFTSATITYLAQEDG-PVVIGSTSAPGQGGILAQREFDRRFSPHFLDW 150
Query: 419 AAFAVMTLPSLAIPFGLWY 363
AAF VMTLPS+ IP LWY
Sbjct: 151 AAFGVMTLPSIGIPLLLWY 169
>AL355388-11|CAH72631.1| 202|Homo sapiens signal sequence receptor,
beta (translocon-associated protein beta) protein.
Length = 202
Score = 159 bits (385), Expect = 1e-38
Identities = 73/139 (52%), Positives = 99/139 (71%)
Frame = -3
Query: 779 KYLVEXMDILVKYTLFNVGSAPAVEVKLVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSH 600
+Y VE D+ ++Y ++NVGS+ A++V+L D+ F P+ F +V G L + DRIAP +NVSH
Sbjct: 51 RYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSH 110
Query: 599 VVTVRSNKYGYFNFSSAEVTYKASEDATDVQYSISSAPGEGAIVAFKDYDRKFSSHILDW 420
V +R K GYFNF+SA +TY A ED V +SAPG+G I+A +++DR+FS H LDW
Sbjct: 111 TVVLRPLKAGYFNFTSATITYLAQEDG-PVVIGSTSAPGQGGILAQREFDRRFSPHFLDW 169
Query: 419 AAFAVMTLPSLAIPFGLWY 363
AAF VMTLPS+ IP LWY
Sbjct: 170 AAFGVMTLPSIGIPLLLWY 188
>AK222600-1|BAD96320.1| 183|Homo sapiens signal sequence receptor,
beta precursor variant protein.
Length = 183
Score = 157 bits (382), Expect = 3e-38
Identities = 73/139 (52%), Positives = 98/139 (70%)
Frame = -3
Query: 779 KYLVEXMDILVKYTLFNVGSAPAVEVKLVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSH 600
+Y VE D+ ++Y +NVGS+ A++V+L D+ F P+ F +V G L + DRIAP +NVSH
Sbjct: 32 RYAVEGRDLTLQYNTYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSH 91
Query: 599 VVTVRSNKYGYFNFSSAEVTYKASEDATDVQYSISSAPGEGAIVAFKDYDRKFSSHILDW 420
V +R K GYFNF+SA +TY A ED V +SAPG+G I+A +++DR+FS H LDW
Sbjct: 92 TVVLRPLKAGYFNFTSATITYLAQEDG-PVVIGSTSAPGQGGILAQREFDRRFSPHFLDW 150
Query: 419 AAFAVMTLPSLAIPFGLWY 363
AAF VMTLPS+ IP LWY
Sbjct: 151 AAFGVMTLPSIGIPLLLWY 169
>BX649192-1|CAE46211.1| 143|Homo sapiens hypothetical protein
protein.
Length = 143
Score = 96.7 bits (230), Expect = 8e-20
Identities = 43/86 (50%), Positives = 61/86 (70%)
Frame = -3
Query: 779 KYLVEXMDILVKYTLFNVGSAPAVEVKLVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSH 600
+Y VE D+ ++Y ++NVGS+ A++V+L D+ F P+ F +V G L + DRIAP +NVSH
Sbjct: 53 RYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSH 112
Query: 599 VVTVRSNKYGYFNFSSAEVTYKASED 522
V +R K GYFNF+SA +TY A ED
Sbjct: 113 TVVLRPLKAGYFNFTSATITYLAQED 138
>AL355388-12|CAH72632.1| 146|Homo sapiens signal sequence receptor,
beta (translocon-associated protein beta) protein.
Length = 146
Score = 96.7 bits (230), Expect = 8e-20
Identities = 43/86 (50%), Positives = 61/86 (70%)
Frame = -3
Query: 779 KYLVEXMDILVKYTLFNVGSAPAVEVKLVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSH 600
+Y VE D+ ++Y ++NVGS+ A++V+L D+ F P+ F +V G L + DRIAP +NVSH
Sbjct: 51 RYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSH 110
Query: 599 VVTVRSNKYGYFNFSSAEVTYKASED 522
V +R K GYFNF+SA +TY A ED
Sbjct: 111 TVVLRPLKAGYFNFTSATITYLAQED 136
>L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain
protein protein.
Length = 3703
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 631 SISAVSCPPTTVNTSGWKPLSTSFTSTAGALPTLN 735
SIS S P+ V+TSG +TS S+AG P+ N
Sbjct: 1644 SISLSSSTPSPVSTSGSNTFTTSNPSSAGIAPSSN 1678
>D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhancer
binding protein protein.
Length = 2783
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 631 SISAVSCPPTTVNTSGWKPLSTSFTSTAGALPTLN 735
SIS S P+ V+TSG +TS S+AG P+ N
Sbjct: 730 SISLSSSTPSPVSTSGSNTFTTSNPSSAGIAPSSN 764
>BC029653-1|AAH29653.1| 886|Homo sapiens ZFHX3 protein protein.
Length = 886
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 631 SISAVSCPPTTVNTSGWKPLSTSFTSTAGALPTLN 735
SIS S P+ V+TSG +TS S+AG P+ N
Sbjct: 730 SISLSSSTPSPVSTSGSNTFTTSNPSSAGIAPSSN 764
>AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.
Length = 2553
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 631 SISAVSCPPTTVNTSGWKPLSTSFTSTAGALPTLN 735
SIS S P+ V+TSG +TS S+AG P+ N
Sbjct: 494 SISLSSSTPSPVSTSGSNTFTTSNPSSAGIAPSSN 528
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,444,118
Number of Sequences: 237096
Number of extensions: 2260863
Number of successful extensions: 4129
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4123
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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