Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_C01
         (781 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41274-1|AAA82458.1|  188|Caenorhabditis elegans Hypothetical pr...    89   2e-18
Z68879-2|CAA93083.1|  182|Caenorhabditis elegans Hypothetical pr...    41   9e-04
AF000262-9|AAN60529.1|  820|Caenorhabditis elegans Hypothetical ...    29   3.7  

>U41274-1|AAA82458.1|  188|Caenorhabditis elegans Hypothetical
           protein T04G9.5 protein.
          Length = 188

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 44/130 (33%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
 Frame = -3

Query: 776 YLVEXMDILVKYTLFNVGSAPAVEVKLVD-NGFHPDVFTVVGGQLTAEIDRIAPQTNVSH 600
           Y VE MD +++Y L+NVG  PA +V + D + F  + F +V G L    ++I   +NV+H
Sbjct: 37  YAVENMDFVLEYGLYNVGDKPAQKVTIDDRHSFPTNSFDIVKGLLFVHFEQIPAGSNVTH 96

Query: 599 VVTVRSNKYGYFNFSSAEVTYKASEDATDVQYSISSAPGEGAIVAFKDYDRKFSSHILDW 420
            V +R   +G+FN+++A+VTY    +   V  ++++ PGEG I   ++YDR+F+     +
Sbjct: 97  SVVIRPRAFGFFNYTAAQVTYYTDNENHHV--TLTNTPGEGYIYRQREYDRRFAPKYTYF 154

Query: 419 AAFAVMTLPS 390
             F ++  P+
Sbjct: 155 LVFFLIVAPT 164


>Z68879-2|CAA93083.1|  182|Caenorhabditis elegans Hypothetical
           protein K08F4.3 protein.
          Length = 182

 Score = 41.1 bits (92), Expect = 9e-04
 Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 3/142 (2%)
 Frame = -3

Query: 779 KYLVEXMDILVKYTLFNVGSAPAVEVKLVD-NGFHPDVFTVVGGQLTAEIDRIAPQTNVS 603
           KY V   +   +Y + N+G +PA++V+L D   F  D F ++ G  TA    I   + + 
Sbjct: 29  KYPVAQRENAFEYQIINIGLSPALKVELSDLKSFPTDRFEILKGSATASFPVIPANSTIY 88

Query: 602 HVVTVRSNKYGYFNFSSAEVTYKASEDATDVQYSISSAPGEGAIVAFKDYD-RKFSS-HI 429
           H + V              V Y  SE     + S  S    G    F +   RK    + 
Sbjct: 89  HHIVVIPRVPQAIEDHDVTVNYTDSETGKRARTSTVSYDKRGYTHFFAETAMRKVEGVNC 148

Query: 428 LDWAAFAVMTLPSLAIPFGLWY 363
             +  F  +  P  AIP  L++
Sbjct: 149 THFLGFGAIAFPLTAIPAILYW 170


>AF000262-9|AAN60529.1|  820|Caenorhabditis elegans Hypothetical
           protein C48E7.8 protein.
          Length = 820

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -3

Query: 722 SAPAVEVKLVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSH 600
           S  A+ V L  NG++  VF V GGQ    + R++    +SH
Sbjct: 633 SGLAILVVLAQNGYNFGVFKVFGGQTLVVLSRLSFGVYLSH 673


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,632,257
Number of Sequences: 27780
Number of extensions: 367532
Number of successful extensions: 925
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)