Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_B21
(797 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062329-1|AAH62329.1| 166|Homo sapiens chromosome 12 open read... 107 5e-23
BC018145-1|AAH18145.1| 166|Homo sapiens chromosome 12 open read... 107 5e-23
AK095982-1|BAC04665.1| 166|Homo sapiens protein ( Homo sapiens ... 107 5e-23
AF061733-1|AAG43144.1| 166|Homo sapiens My030 protein protein. 107 5e-23
BC020885-1|AAH20885.1| 119|Homo sapiens C12orf65 protein protein. 66 2e-10
BC042196-1|AAH42196.1| 445|Homo sapiens mitochondrial translati... 48 5e-05
AL354696-5|CAI16615.1| 445|Homo sapiens mitochondrial translati... 48 5e-05
AF072934-1|AAD12759.1| 445|Homo sapiens translational release f... 48 5e-05
BC011873-1|AAH11873.1| 380|Homo sapiens mitochondrial translati... 45 4e-04
AL080276-8|CAB65994.1| 380|Homo sapiens mitochondrial translati... 45 4e-04
AL080276-5|CAI18897.1| 231|Homo sapiens mitochondrial translati... 45 4e-04
AL080276-4|CAI18896.1| 164|Homo sapiens mitochondrial translati... 45 4e-04
AK027684-1|BAB55295.1| 238|Homo sapiens protein ( Homo sapiens ... 45 4e-04
BC100276-1|AAI00277.1| 88|Homo sapiens LYR motif containing 5 ... 38 0.042
BC071769-1|AAH71769.1| 88|Homo sapiens LYR motif containing 5 ... 38 0.042
Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental ... 32 2.8
Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental ... 32 2.8
U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein ... 32 2.8
U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase prot... 32 2.8
U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent AT... 32 2.8
U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent AT... 32 2.8
U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent AT... 32 2.8
U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent AT... 32 2.8
U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent AT... 32 2.8
U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent AT... 32 2.8
U09820-1|AAC50069.1| 1641|Homo sapiens helicase II protein. 32 2.8
L34363-1|AAA20872.1| 1298|Homo sapiens X-linked nuclear protein ... 32 2.8
EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/menta... 32 2.8
AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/menta... 32 2.8
AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/menta... 32 2.8
AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/menta... 32 2.8
AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/menta... 32 2.8
AB209545-1|BAD92782.1| 1224|Homo sapiens transcriptional regulat... 32 2.8
AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein. 32 2.8
AB208928-1|BAD92165.1| 1383|Homo sapiens transcriptional regulat... 31 4.8
>BC062329-1|AAH62329.1| 166|Homo sapiens chromosome 12 open reading
frame 65 protein.
Length = 166
Score = 107 bits (257), Expect = 5e-23
Identities = 53/118 (44%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
Frame = -1
Query: 431 DYSKVPKINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKK 252
DY + ++E EL E+FV+G GPGG A NK SNCVVL HIP+G V+KCH +R D NRK
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 107
Query: 251 ARELLIEKLDDMINGPES-VSAQRKLIEEKKYKRNATKKQKISK---LKDEWKKREGI 90
AR++L EK+D NG S V +++ +KK +R K+ + K LK+ W+ + +
Sbjct: 108 ARKILQEKVDVFYNGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWESSKKV 165
>BC018145-1|AAH18145.1| 166|Homo sapiens chromosome 12 open reading
frame 65 protein.
Length = 166
Score = 107 bits (257), Expect = 5e-23
Identities = 53/118 (44%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
Frame = -1
Query: 431 DYSKVPKINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKK 252
DY + ++E EL E+FV+G GPGG A NK SNCVVL HIP+G V+KCH +R D NRK
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 107
Query: 251 ARELLIEKLDDMINGPES-VSAQRKLIEEKKYKRNATKKQKISK---LKDEWKKREGI 90
AR++L EK+D NG S V +++ +KK +R K+ + K LK+ W+ + +
Sbjct: 108 ARKILQEKVDVFYNGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWESSKKV 165
>AK095982-1|BAC04665.1| 166|Homo sapiens protein ( Homo sapiens
cDNA FLJ38663 fis, clone HLUNG2001712, weakly similar to
PEPTIDE CHAIN RELEASE FACTOR 2. ).
Length = 166
Score = 107 bits (257), Expect = 5e-23
Identities = 53/118 (44%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
Frame = -1
Query: 431 DYSKVPKINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKK 252
DY + ++E EL E+FV+G GPGG A NK SNCVVL HIP+G V+KCH +R D NRK
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 107
Query: 251 ARELLIEKLDDMINGPES-VSAQRKLIEEKKYKRNATKKQKISK---LKDEWKKREGI 90
AR++L EK+D NG S V +++ +KK +R K+ + K LK+ W+ + +
Sbjct: 108 ARKILQEKVDVFYNGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWESSKKV 165
>AF061733-1|AAG43144.1| 166|Homo sapiens My030 protein protein.
Length = 166
Score = 107 bits (257), Expect = 5e-23
Identities = 53/118 (44%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
Frame = -1
Query: 431 DYSKVPKINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKK 252
DY + ++E EL E+FV+G GPGG A NK SNCVVL HIP+G V+KCH +R D NRK
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 107
Query: 251 ARELLIEKLDDMINGPES-VSAQRKLIEEKKYKRNATKKQKISK---LKDEWKKREGI 90
AR++L EK+D NG S V +++ +KK +R K+ + K LK+ W+ + +
Sbjct: 108 ARKILQEKVDVFYNGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWESSKKV 165
>BC020885-1|AAH20885.1| 119|Homo sapiens C12orf65 protein protein.
Length = 119
Score = 65.7 bits (153), Expect = 2e-10
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = -1
Query: 431 DYSKVPKINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIK 291
DY + ++E EL E+FV+G GPGG A NK SNCVVL HIP+G V+K
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVK 94
>BC042196-1|AAH42196.1| 445|Homo sapiens mitochondrial
translational release factor 1 protein.
Length = 445
Score = 47.6 bits (108), Expect = 5e-05
Identities = 25/67 (37%), Positives = 35/67 (52%)
Frame = -1
Query: 413 KINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLI 234
K++ +L R G GG VNK + V L HIPTG V++C R Q N++ A +L
Sbjct: 294 KLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLR 353
Query: 233 EKLDDMI 213
+L I
Sbjct: 354 ARLYQQI 360
>AL354696-5|CAI16615.1| 445|Homo sapiens mitochondrial
translational release factor 1 protein.
Length = 445
Score = 47.6 bits (108), Expect = 5e-05
Identities = 25/67 (37%), Positives = 35/67 (52%)
Frame = -1
Query: 413 KINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLI 234
K++ +L R G GG VNK + V L HIPTG V++C R Q N++ A +L
Sbjct: 294 KLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLR 353
Query: 233 EKLDDMI 213
+L I
Sbjct: 354 ARLYQQI 360
>AF072934-1|AAD12759.1| 445|Homo sapiens translational release
factor 1 protein.
Length = 445
Score = 47.6 bits (108), Expect = 5e-05
Identities = 25/67 (37%), Positives = 35/67 (52%)
Frame = -1
Query: 413 KINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLI 234
K++ +L R G GG VNK + V L HIPTG V++C R Q N++ A +L
Sbjct: 294 KLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLR 353
Query: 233 EKLDDMI 213
+L I
Sbjct: 354 ARLYQQI 360
>BC011873-1|AAH11873.1| 380|Homo sapiens mitochondrial
translational release factor 1-like protein.
Length = 380
Score = 44.8 bits (101), Expect = 4e-04
Identities = 25/65 (38%), Positives = 32/65 (49%)
Frame = -1
Query: 410 INECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLIE 231
IN +L R SG GG VN + V + H+PTG V +C R Q N++ A L
Sbjct: 234 INPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRA 293
Query: 230 KLDDM 216
KL M
Sbjct: 294 KLYSM 298
>AL080276-8|CAB65994.1| 380|Homo sapiens mitochondrial
translational release factor 1-like protein.
Length = 380
Score = 44.8 bits (101), Expect = 4e-04
Identities = 25/65 (38%), Positives = 32/65 (49%)
Frame = -1
Query: 410 INECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLIE 231
IN +L R SG GG VN + V + H+PTG V +C R Q N++ A L
Sbjct: 234 INPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRA 293
Query: 230 KLDDM 216
KL M
Sbjct: 294 KLYSM 298
>AL080276-5|CAI18897.1| 231|Homo sapiens mitochondrial
translational release factor 1-like protein.
Length = 231
Score = 44.8 bits (101), Expect = 4e-04
Identities = 25/65 (38%), Positives = 32/65 (49%)
Frame = -1
Query: 410 INECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLIE 231
IN +L R SG GG VN + V + H+PTG V +C R Q N++ A L
Sbjct: 85 INPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRA 144
Query: 230 KLDDM 216
KL M
Sbjct: 145 KLYSM 149
>AL080276-4|CAI18896.1| 164|Homo sapiens mitochondrial
translational release factor 1-like protein.
Length = 164
Score = 44.8 bits (101), Expect = 4e-04
Identities = 25/65 (38%), Positives = 32/65 (49%)
Frame = -1
Query: 410 INECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLIE 231
IN +L R SG GG VN + V + H+PTG V +C R Q N++ A L
Sbjct: 98 INPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRA 157
Query: 230 KLDDM 216
KL M
Sbjct: 158 KLYSM 162
>AK027684-1|BAB55295.1| 238|Homo sapiens protein ( Homo sapiens
cDNA FLJ14778 fis, clone NT2RP4000370, moderately
similar to MITOCHONDRIAL PEPTIDE CHAIN RELEASE FACTOR 1
PRECURSOR. ).
Length = 238
Score = 44.8 bits (101), Expect = 4e-04
Identities = 25/65 (38%), Positives = 32/65 (49%)
Frame = -1
Query: 410 INECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLIE 231
IN +L R SG GG VN + V + H+PTG V +C R Q N++ A L
Sbjct: 92 INPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRA 151
Query: 230 KLDDM 216
KL M
Sbjct: 152 KLYSM 156
>BC100276-1|AAI00277.1| 88|Homo sapiens LYR motif containing 5
protein.
Length = 88
Score = 37.9 bits (84), Expect = 0.042
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = -3
Query: 705 NITRKEVLRLYRNLLMYSKSLKLTDPDYFRRSIKIEFKNNQNLTDLEKISFAYQKGQALL 526
N R EVL+LY+NLL + DYF++ +K F N+++ + EKI +G+ ++
Sbjct: 3 NSLRGEVLKLYKNLLYLGRDYP-KGADYFKKRLKNIFLKNKDVKNPEKIKELIAQGEFVM 61
Query: 525 Q 523
+
Sbjct: 62 K 62
>BC071769-1|AAH71769.1| 88|Homo sapiens LYR motif containing 5
protein.
Length = 88
Score = 37.9 bits (84), Expect = 0.042
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = -3
Query: 705 NITRKEVLRLYRNLLMYSKSLKLTDPDYFRRSIKIEFKNNQNLTDLEKISFAYQKGQALL 526
N R EVL+LY+NLL + DYF++ +K F N+++ + EKI +G+ ++
Sbjct: 3 NSLRGEVLKLYKNLLYLGRDYP-KGADYFKKRLKNIFLKNKDVKNPEKIKELIAQGEFVM 61
Query: 525 Q 523
+
Sbjct: 62 K 62
>Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 1234 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 1292
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1293 DDEPEEGKKRTG 1304
>Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 1196 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 1254
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1255 DDEPEEGKKRTG 1266
>U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein
protein.
Length = 2375
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 1117 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 1175
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1176 DDEPEEGKKRTG 1187
>U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase protein.
Length = 2492
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 1234 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 1292
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1293 DDEPEEGKKRTG 1304
>U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2454
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 1196 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 1254
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1255 DDEPEEGKKRTG 1266
>U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2492
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 1234 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 1292
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1293 DDEPEEGKKRTG 1304
>U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2288
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 1030 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 1088
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1089 DDEPEEGKKRTG 1100
>U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2288
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 1030 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 1088
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1089 DDEPEEGKKRTG 1100
>U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2337
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 1079 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 1137
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1138 DDEPEEGKKRTG 1149
>U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2375
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 1117 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 1175
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1176 DDEPEEGKKRTG 1187
>U09820-1|AAC50069.1| 1641|Homo sapiens helicase II protein.
Length = 1641
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 375 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 433
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 434 DDEPEEGKKRTG 445
>L34363-1|AAA20872.1| 1298|Homo sapiens X-linked nuclear protein
protein.
Length = 1298
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 115 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 173
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 174 DDEPEEGKKRTG 185
>EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked protein.
Length = 2492
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 1234 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 1292
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1293 DDEPEEGKKRTG 1304
>AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 1234 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 1292
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1293 DDEPEEGKKRTG 1304
>AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 1196 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 1254
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1255 DDEPEEGKKRTG 1266
>AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 1234 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 1292
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1293 DDEPEEGKKRTG 1304
>AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 1196 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 1254
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1255 DDEPEEGKKRTG 1266
>AB209545-1|BAD92782.1| 1224|Homo sapiens transcriptional regulator
ATRX isoform 1 variant protein.
Length = 1224
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 531 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 589
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 590 DDEPEEGKKRTG 601
>AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein.
Length = 2492
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K ++ +
Sbjct: 1234 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSSDEDGSS 1292
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1293 DDEPEEGKKRTG 1304
>AB208928-1|BAD92165.1| 1383|Homo sapiens transcriptional regulator
ATRX isoform 2 variant protein.
Length = 1383
Score = 31.1 bits (67), Expect = 4.8
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = -1
Query: 299 VIKCHTSRCQ---DDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKI 129
V+ HT CQ D+ K+ + ++ DD N PE+ A++ L+EE K + +
Sbjct: 1199 VLSSHTGFCQSSGDEALSKSVPVTVDD-DDDDNDPENRIAKKMLLEEIKANLSPDEDGSS 1257
Query: 128 SKLKDEWKKREG 93
+E KKR G
Sbjct: 1258 DDEPEEGKKRTG 1269
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,275,183
Number of Sequences: 237096
Number of extensions: 2173035
Number of successful extensions: 8450
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 8186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8439
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -