Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_B21
(797 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93390-2|CAE17950.1| 125|Caenorhabditis elegans Hypothetical pr... 71 1e-12
AF039041-6|AAB94190.1| 389|Caenorhabditis elegans Hypothetical ... 44 2e-04
Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical pr... 37 0.019
AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical ... 37 0.019
AL033514-39|CAA22095.2| 401|Caenorhabditis elegans Hypothetical... 33 0.24
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 31 1.3
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 30 1.7
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 30 1.7
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 30 1.7
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 30 1.7
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 29 2.9
AL032637-17|CAD60427.1| 294|Caenorhabditis elegans Hypothetical... 29 2.9
Z81114-2|CAB03286.1| 604|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z47070-3|CAA87341.1| 528|Caenorhabditis elegans Hypothetical pr... 29 3.9
U00068-1|AAA50745.1| 85|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF043697-2|AAB97556.1| 820|Caenorhabditis elegans Patched relat... 29 3.9
AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical... 29 5.1
Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical pr... 28 6.7
U42436-3|AAL02471.1| 498|Caenorhabditis elegans Hypothetical pr... 28 6.7
U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical pr... 28 6.7
AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical... 28 6.7
U00047-10|AAA50686.1| 471|Caenorhabditis elegans Hypothetical p... 28 8.9
>Z93390-2|CAE17950.1| 125|Caenorhabditis elegans Hypothetical
protein T23B5.4 protein.
Length = 125
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/103 (35%), Positives = 55/103 (53%)
Frame = -1
Query: 413 KINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLI 234
K+ + +K++ G GPGG VN N V LTH+PTGTV+K H SR N A E +
Sbjct: 18 KLKNYKFPDKYISGWGPGGQKVNTAQNAVQLTHLPTGTVLKVHESRLLPKNIDIAFERMK 77
Query: 233 EKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKISKLKDEWK 105
LD ING Q K ++ K +++ ++ + K K+ +K
Sbjct: 78 FVLDRQINGENCYEEQLKRLQIAKEEKSNKRRVQARKEKESYK 120
>AF039041-6|AAB94190.1| 389|Caenorhabditis elegans Hypothetical
protein W03F8.3 protein.
Length = 389
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Frame = -1
Query: 380 VRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDN-----RKKARELLIEKLDDM 216
+R SGPGG VNK S V +TH TG + C R Q N ++ A L+ +++D M
Sbjct: 251 MRASGPGGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKRLAAILMQKQVDAM 310
Query: 215 INGPESVSAQRKL 177
+ E + ++RKL
Sbjct: 311 L---EKIVSKRKL 320
>Z49128-8|CAA88960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 36.7 bits (81), Expect = 0.019
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Frame = -1
Query: 431 DYSKVPKINECELSEKFVRGSGPGGS-----AVNKNSNCVVLTHIPTGTVIKCHTSRCQD 267
D S+ IN+ E+SEK GSG G K+S +T + G +K ++ Q
Sbjct: 188 DESEDDFINDEEISEK---GSGKGSEKEESEGSGKDSETEEVT-MKQGQSLKAAMAKAQK 243
Query: 266 DNRKKAR--ELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQK 132
+ +KKA E E DDM + + IEE++ KR TK QK
Sbjct: 244 EQKKKAESDEDWEEDEDDMNADGDETPSDDSDIEERRAKRGETKNQK 290
>AL021171-6|CAA15960.2| 989|Caenorhabditis elegans Hypothetical
protein M03C11.8 protein.
Length = 989
Score = 36.7 bits (81), Expect = 0.019
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Frame = -1
Query: 431 DYSKVPKINECELSEKFVRGSGPGGS-----AVNKNSNCVVLTHIPTGTVIKCHTSRCQD 267
D S+ IN+ E+SEK GSG G K+S +T + G +K ++ Q
Sbjct: 188 DESEDDFINDEEISEK---GSGKGSEKEESEGSGKDSETEEVT-MKQGQSLKAAMAKAQK 243
Query: 266 DNRKKAR--ELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQK 132
+ +KKA E E DDM + + IEE++ KR TK QK
Sbjct: 244 EQKKKAESDEDWEEDEDDMNADGDETPSDDSDIEERRAKRGETKNQK 290
>AL033514-39|CAA22095.2| 401|Caenorhabditis elegans Hypothetical
protein Y75B8A.5 protein.
Length = 401
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Frame = -3
Query: 675 YRNLLMYSKSLKLTDPDYFRRSIK---IEFKNNQNLTDLEKISF 553
Y +L++ + S++ + + FR+ K IEF+NN NL +EK++F
Sbjct: 68 YESLVIRNSSVRTIEKNSFRKMEKLMQIEFENNPNLGTIEKLAF 111
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = -1
Query: 233 EKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKISKLKDEWKKRE 96
+K + + S S+ E++K++++ KK+K KLK+ K+RE
Sbjct: 185 KKQESSSSSSSSSSSSESSSEDEKHRKDRKKKEKKQKLKEMEKRRE 230
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 553 RVSERSGLAAERVSCVTCSCSLQNILEISVHA*QLPLNIQ*IIPKYQRSMSVNY 392
R +SGL ++ + CSL N+LE+S Q N +P + RS Y
Sbjct: 712 RKISKSGLTFRQIGSTSLRCSLNNLLEMSDRTRQSLSNSLSFLPHFTRSSGSLY 765
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 553 RVSERSGLAAERVSCVTCSCSLQNILEISVHA*QLPLNIQ*IIPKYQRSMSVNY 392
R +SGL ++ + CSL N+LE+S Q N +P + RS Y
Sbjct: 770 RKISKSGLTFRQIGSTSLRCSLNNLLEMSDRTRQSLSNSLSFLPHFTRSSGSLY 823
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 553 RVSERSGLAAERVSCVTCSCSLQNILEISVHA*QLPLNIQ*IIPKYQRSMSVNY 392
R +SGL ++ + CSL N+LE+S Q N +P + RS Y
Sbjct: 823 RKISKSGLTFRQIGSTSLRCSLNNLLEMSDRTRQSLSNSLSFLPHFTRSSGSLY 876
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 553 RVSERSGLAAERVSCVTCSCSLQNILEISVHA*QLPLNIQ*IIPKYQRSMSVNY 392
R +SGL ++ + CSL N+LE+S Q N +P + RS Y
Sbjct: 742 RKISKSGLTFRQIGSTSLRCSLNNLLEMSDRTRQSLSNSLSFLPHFTRSSGSLY 795
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = -1
Query: 272 QDDNRKKARELLIEKLDDMINGPESVSAQR----KLIEEKKYKRNATKKQKISKLKDEWK 105
+++ K+ RE + E+ I + +R KL EEK+ + +K+++ K +E K
Sbjct: 89 REEREKQKREKMEEREKQRIERERILEEKRLEKDKLAEEKRLDKEKKEKERLDKKLEEDK 148
Query: 104 KRE 96
K+E
Sbjct: 149 KKE 151
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = -1
Query: 266 DNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKISKLKDEWKKRE 96
D KK +E L +KL++ + +RK EEKK K++ +K K + +++ KK E
Sbjct: 131 DKEKKEKERLDKKLEE----DKKKEEKRKEAEEKK-KKDEEEKMKKDEERNKRKKEE 182
>AL032637-17|CAD60427.1| 294|Caenorhabditis elegans Hypothetical
protein Y43F8C.19 protein.
Length = 294
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 121 NLDIFCFFVAFRLYFFSSISFLCADTLS 204
++ FCF V+F LYF S + L TLS
Sbjct: 187 SISTFCFLVSFTLYFTSILYILKTKTLS 214
>Z81114-2|CAB03286.1| 604|Caenorhabditis elegans Hypothetical
protein T04D3.2 protein.
Length = 604
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/76 (18%), Positives = 37/76 (48%)
Frame = -1
Query: 314 IPTGTVIKCHTSRCQDDNRKKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQ 135
I T +K + +++ RKK + ++ +K+ + + ++K++EE++ +
Sbjct: 436 IQTPVTVKTFIVQMEEERRKKTK-IIYDKVQLAKKKNKEIKLKKKVLEEEEKTEKMMENM 494
Query: 134 KISKLKDEWKKREGII 87
+ +D+ KK E +
Sbjct: 495 TLENSEDQSKKDEATV 510
>Z47070-3|CAA87341.1| 528|Caenorhabditis elegans Hypothetical
protein T09B9.4 protein.
Length = 528
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = -1
Query: 305 GTVIKCHTSRCQDDNRKKAR-ELLIEKLDDMIN--GPESVSAQRKLIEEKKYKRNATKKQ 135
GTV + H + DN KK R EL E LD M + V++QRK E K A K+
Sbjct: 116 GTVYRVHHTTPLPDNHKKLRKELPFEMLDLMYRFFRQKHVNSQRK--RENKELLEANKQL 173
Query: 134 KISKLK 117
+I+ ++
Sbjct: 174 RIAAVQ 179
>U00068-1|AAA50745.1| 85|Caenorhabditis elegans Hypothetical
protein W04D12.1 protein.
Length = 85
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = -1
Query: 254 KARELLIEKLDDMINGPESVSAQRKLIEEKKYKR-----NATKKQKISKLKDEWKKRE 96
+ RE+ E+ D +G + + +K+KR KK+K K+KDE KK+E
Sbjct: 15 REREIEKERSKDEFHGLIEIDGECMQSGNRKWKRIDSAVKVAKKEKKKKMKDEEKKKE 72
>AF043697-2|AAB97556.1| 820|Caenorhabditis elegans Patched related
family protein 11 protein.
Length = 820
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -3
Query: 105 ETGRHNIIFSLCVDDFFSISKNINSFKHAMFCL 7
+T + F +D+ F +SKN ++F+H F +
Sbjct: 191 DTPEGKLAFKDAIDELFQLSKNSSAFEHVQFTI 223
>AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical
protein Y73F8A.20 protein.
Length = 541
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -1
Query: 215 INGPESVSAQRKLIEEKKYKRNATKKQKISK--LKDEWKKRE 96
IN PE + +R +I +K+ T+KQ++ + K E K++E
Sbjct: 425 INAPERIRHRRTIITKKRRNTKITRKQRLLRKVRKSEEKEKE 466
>Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical
protein F11A10.3 protein.
Length = 522
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = -1
Query: 257 KKARELLIEKLDDMINGPESVSAQRKLIEEKKYKRNATKKQKISKLKDEWKKRE 96
K+ ++ + E+ + I E + + IEE K + T +QK++KL+ + ++RE
Sbjct: 193 KRKKKPVEEETAEEIKLRERAERKARRIEEAKNRPKLTIEQKLAKLRKKKERRE 246
>U42436-3|AAL02471.1| 498|Caenorhabditis elegans Hypothetical
protein C49H3.6b protein.
Length = 498
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -1
Query: 260 RKKARELLIEKLDDMIN-GPESVSAQRKLIEEKKYKRNATKKQKISKLKDE 111
R KA +++++ +D GP S ++R+LIEE K + + ++ S K +
Sbjct: 237 RVKAEQIMLQNQNDPTKPGPSSALSERELIEELKKEVTFLRAERESLTKTQ 287
>U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical
protein C49H3.6a protein.
Length = 552
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -1
Query: 260 RKKARELLIEKLDDMIN-GPESVSAQRKLIEEKKYKRNATKKQKISKLKDE 111
R KA +++++ +D GP S ++R+LIEE K + + ++ S K +
Sbjct: 237 RVKAEQIMLQNQNDPTKPGPSSALSERELIEELKKEVTFLRAERESLTKTQ 287
>AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical
protein Y41D4B.11 protein.
Length = 349
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -1
Query: 203 ESVSAQRKLIEEKKYKRNATKKQKI-SKLKDEWKKRE 96
E + A K+IE+ + ++ +K++I +K+K+ KKRE
Sbjct: 127 EEIDADYKIIEDAEKRKKEQEKREIENKIKEARKKRE 163
>U00047-10|AAA50686.1| 471|Caenorhabditis elegans Hypothetical
protein ZK418.2a protein.
Length = 471
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/76 (19%), Positives = 33/76 (43%)
Frame = -1
Query: 617 GAQLKSNSKITKT*LIWRKLASRIRKVRPCCREGQLCDMFLLTSKYFRNFSPRLAAAFKH 438
G Q++SN + + L+ + V+ C +EG LC +L + + +
Sbjct: 106 GQQIRSNCCVVQHNLVMHSFVYSLAVVKDCKQEGFLCKFSVLPVSHTYRYPIEMKKGGVP 165
Query: 437 TIDYSKVPKINECELS 390
+VP++N+ + +
Sbjct: 166 VTFKPEVPELNDVKFT 181
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,920,549
Number of Sequences: 27780
Number of extensions: 381476
Number of successful extensions: 1348
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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