Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_B20
(774 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 182 4e-47
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 57 3e-09
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 41 2e-04
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 39 0.001
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 32 0.10
SPBC1685.07c |||amino acid transporter |Schizosaccharomyces pomb... 29 0.56
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.74
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 27 2.3
SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase Ggt2|Schizosacc... 27 3.9
SPBC17G9.04c |nup85||nucleoporin Nup85|Schizosaccharomyces pombe... 27 3.9
SPAC513.02 |||phosphoglycerate mutase family|Schizosaccharomyces... 27 3.9
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 25 9.1
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 182 bits (444), Expect = 4e-47
Identities = 90/169 (53%), Positives = 124/169 (73%), Gaps = 3/169 (1%)
Frame = -1
Query: 774 KLQXRLARLASGVAVLHVGGSSEVEVNEKKDRVNDALNATRAAVEEGIVPGGGSALLRCI 595
KLQ RLA+L+ G+AV+ VGGSSEVEVNEKKDR+ DALNA +AAV EG++PG G++ ++
Sbjct: 396 KLQERLAKLSGGIAVIKVGGSSEVEVNEKKDRIVDALNAVKAAVSEGVLPGAGTSFVKAS 455
Query: 594 PVLEQLKTVNSDQATGVEIVKKALRMPCMTIAKNAGIDGSVVVAKVEDL-GDEF--GYDA 424
L + T N DQ GVEIV+KA+ P TI +NAG++G+++V K+++L G EF GYD
Sbjct: 456 LRLGDIPTNNFDQKLGVEIVRKAITRPAQTILENAGLEGNLIVGKLKELYGKEFNIGYDI 515
Query: 423 LNNEYVNMIEKGIIDPTKVVRTALTDASGVASLLTTAEAVICEIPQEKE 277
+ +V++ E G++DP KVVRT L DASGVASL+ T E I + P+E +
Sbjct: 516 AKDRFVDLNEIGVLDPLKVVRTGLVDASGVASLMGTTECAIVDAPEESK 564
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 56.8 bits (131), Expect = 3e-09
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Frame = -1
Query: 717 GSSEVEVNEKKDRVNDALNATRAAVEEGIVP-GGGSALLRCIPVLEQLKTVN-SDQATGV 544
G++ ++E + ++DAL V E V GGG A + +E+ T +A V
Sbjct: 373 GATHQLLDESERAIHDALAVLSQTVAESRVTLGGGCAEMLMAKAVEEAATHEPGKKAVAV 432
Query: 543 EIVKKALRMPCMTIAKNAGIDGSVVVAKVE----DLGDEFGYDALNNEYVNMIEKGIIDP 376
KAL +A NAG D S +VA+++ D D G D E +M KGI++
Sbjct: 433 SAFAKALSQLPTILADNAGFDSSELVAQLKAAHYDGNDTMGLDMDEGEIADMRAKGILEA 492
Query: 375 TKVVRTALTDASGVASLLTTAEAVICEIPQEKE 277
K+ + ++ S A LL + ++ P+ +E
Sbjct: 493 LKLKQAVVSSGSEGAQLLLRVDTILKAAPRPRE 525
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 41.1 bits (92), Expect = 2e-04
Identities = 33/156 (21%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Frame = -1
Query: 717 GSSEVEVNEKKDRVNDALNATRAAVEEGI-VPGGGSALLRCIPVLEQLK-TVNSDQATGV 544
G ++ + E + ++DA+ + A++ + V GGG+ + L T++ Q +
Sbjct: 381 GGADQFIAEVERSLHDAIMIVKHALKNNLVVAGGGACEMELSKYLRDYSLTISGKQQNFI 440
Query: 543 EIVKKALRMPCMTIAKNAGIDGSVVVAKV---EDLGDEF-GYDALNNEYVNMIEKGIIDP 376
++L + + NAG D + ++ K+ G+ + G D + N EK + +P
Sbjct: 441 AAFARSLEVIPRQLCDNAGFDSTNILNKLRMQHAKGEMWAGVDMDSEGVANNFEKFVWEP 500
Query: 375 TKVVRTALTDASGVASLLTTAEAVICEIPQEKEPNP 268
+ V A+ A+ A+L+ + + I P ++ P
Sbjct: 501 STVKSNAILSATEAATLILSVDETIKNEPSQQPQAP 536
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 38.7 bits (86), Expect = 0.001
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Frame = -1
Query: 744 SGVAVLHVGGSSEVEVNEKKDRVNDALNATRAAVEEG-IVPGGGSALLRC-IPVLEQLKT 571
S + V GS+++ V+E K ++DAL R + + +V GGG+A + C + V ++ +
Sbjct: 382 SRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGGAAEISCSLAVTKEAEK 441
Query: 570 VNSDQATGVEIVKKALRMPCMTIAKNAGIDG-----SVVVAKVEDLGDEFGYDALNNEYV 406
+ + AL + +A+N+G+ +V V++ G D L
Sbjct: 442 IPGIDQYSMGAFADALDTIPLALAENSGLSSIEALTAVKARHVKENKAYLGIDCLQTGSN 501
Query: 405 NMIEKGIIDP 376
+M ++ +IDP
Sbjct: 502 DMRKQFVIDP 511
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.9 bits (69), Expect = 0.10
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Frame = +2
Query: 305 TASAVVS--SDATPLASVRAVRTTFVGSMMPFSIMF-TYSLLRASYPNSSPRSSTLATTT 475
T+S++ S S +TPL S + S S + T SLL +S P+S+P SS +TT
Sbjct: 241 TSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTA 300
Query: 476 EPSMPAFFAIVMHGILRAFFTISTPVA*SLLTVLSCSNTGIHLKSAEPPPGTIPSSTA 649
+ V T +T + + L+ +S +N+ ++ P ++ S+TA
Sbjct: 301 TSASSTPLTSVNS-------TTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTA 351
>SPBC1685.07c |||amino acid transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 29.5 bits (63), Expect = 0.56
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 317 VVSSDATPLASVRAVRTTFVGSMMPFSIMFTYSLLRASYPNSSPRSSTLATTTEPSMPAF 496
++SS LA V + +TF+ ++P S+ + +S AS NSSP ++ + +
Sbjct: 343 LLSSLEMVLAFVGSTGSTFISFILPGSLYYFFSHKVASPGNSSPLQLRISRAFAAGLAIY 402
Query: 497 FAIVM 511
+VM
Sbjct: 403 GTVVM 407
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.1 bits (62), Expect = 0.74
Identities = 29/127 (22%), Positives = 58/127 (45%)
Frame = +2
Query: 278 SFSCGISQITASAVVSSDATPLASVRAVRTTFVGSMMPFSIMFTYSLLRASYPNSSPRSS 457
+ S GIS + + SS ++ L+S + ++ S+ S T+S S P+S S
Sbjct: 559 TISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSI 618
Query: 458 TLATTTEPSMPAFFAIVMHGILRAFFTISTPVA*SLLTVLSCSNTGIHLKSAEPPPGTIP 637
+ ++T S + +M S+ ++ S+ T+ S+ + S P T+
Sbjct: 619 SSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTLV 678
Query: 638 SSTAALV 658
SS+++L+
Sbjct: 679 SSSSSLI 685
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 604 QECRTTSRYNTFLNCSSSGI 663
Q+C SR+NT LN SS GI
Sbjct: 800 QQCIDLSRHNTLLNLSSYGI 819
>SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase
Ggt2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 297 HRSQLQQL*AVMQHHWHRSGLSAPPLWGQ 383
H + L Q+ AV +HH G+S P +GQ
Sbjct: 579 HDTPLSQIQAVTRHHSEYYGMSDPRKYGQ 607
>SPBC17G9.04c |nup85||nucleoporin Nup85|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 675
Score = 26.6 bits (56), Expect = 3.9
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 183 KCIQDVHFMKITSCLPYHP 239
KC+ D + +I +C+PY P
Sbjct: 449 KCVADSGYQRIKACIPYVP 467
>SPAC513.02 |||phosphoglycerate mutase family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 216
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 416 LLRASYPNSSPRSSTLATTTEPSMPAFFAIVMHGI-LRAFFTISTP 550
+ +A Y S RS LA FA+V HG+ +R F I P
Sbjct: 134 IYKADYKTSIQRSRVLAEFFAKVPEKVFAVVTHGVDIRLFQKIQKP 179
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 25.4 bits (53), Expect = 9.1
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Frame = -3
Query: 616 FCTLE-MYS---SIRTTQNSQQ*SGHWCRDCKESSE 521
FC MY SI T +S+ +G WCR C+E E
Sbjct: 165 FCNFHSMYQIKLSIHATYDSE--NGFWCRVCRECYE 198
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,894,285
Number of Sequences: 5004
Number of extensions: 56847
Number of successful extensions: 195
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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