SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_B18
         (833 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46793-3|CAA86772.1|  172|Caenorhabditis elegans Hypothetical pr...   125   5e-29
Z34801-8|CAA84331.1|  172|Caenorhabditis elegans Hypothetical pr...   125   5e-29
M23365-1|AAA28113.1|  170|Caenorhabditis elegans myosin light ch...   107   1e-23
AC024089-6|AAK09070.2|  170|Caenorhabditis elegans Myosin light ...   107   1e-23
M23366-1|AAA28114.1|  170|Caenorhabditis elegans myosin light ch...   106   2e-23
AC024089-5|AAK09069.1|  170|Caenorhabditis elegans Myosin light ...   106   2e-23
AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin pr...   101   8e-22
AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin pr...   101   8e-22
Z70034-1|CAA93852.2|  171|Caenorhabditis elegans Hypothetical pr...    82   5e-16
AJ512489-1|CAD54672.1|  171|Caenorhabditis elegans calmodulin-li...    82   5e-16
Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical pr...    81   1e-15
X04259-1|CAA27814.1|  161|Caenorhabditis elegans cal-1 protein.        81   1e-15
Z82282-1|CAB05271.1|  182|Caenorhabditis elegans Hypothetical pr...    70   2e-12
Z81053-2|CAB02878.2|  202|Caenorhabditis elegans Hypothetical pr...    65   5e-11
U70851-8|AAB09131.1|  164|Caenorhabditis elegans Calmodulin rela...    64   2e-10
AC084159-17|AAK39364.1|  116|Caenorhabditis elegans Hypothetical...    62   4e-10
U28740-5|AAA68320.1|  229|Caenorhabditis elegans Hypothetical pr...    55   7e-08
U28731-1|AAA68298.1|  145|Caenorhabditis elegans Hypothetical pr...    53   2e-07
U40423-5|AAA81454.2|  156|Caenorhabditis elegans Unidentified vi...    45   6e-05
Z48585-7|CAA88482.1|  160|Caenorhabditis elegans Hypothetical pr...    44   1e-04
AB079299-1|BAB84566.1|  160|Caenorhabditis elegans troponin C pr...    44   1e-04
U00050-10|AAA50701.1|  153|Caenorhabditis elegans Myosin light c...    42   5e-04
L03412-1|AAA28112.1|  153|Caenorhabditis elegans alkali myosin l...    42   5e-04
Z81120-4|CAB03346.1|  142|Caenorhabditis elegans Hypothetical pr...    42   7e-04
Z70753-8|CAA94763.1|  137|Caenorhabditis elegans Hypothetical pr...    40   0.003
AL110490-6|CAB54442.2|  687|Caenorhabditis elegans Hypothetical ...    39   0.004
U40427-2|AAA81468.2|  159|Caenorhabditis elegans Hypothetical pr...    37   0.015
U41625-3|AAA83326.1|  264|Caenorhabditis elegans Hypothetical pr...    36   0.036
AF098504-1|AAC67412.1|  364|Caenorhabditis elegans Btb and math ...    33   0.25 
U97405-6|AAB53013.2|  142|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z82256-6|CAB05117.2|  616|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AL132902-14|CAE18021.2|  758|Caenorhabditis elegans Hypothetical...    29   3.1  
Z83125-3|CAB05626.1|  424|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z29094-3|CAA82343.1|  358|Caenorhabditis elegans Hypothetical pr...    29   5.4  
U46669-3|AAA85744.2|  737|Caenorhabditis elegans Regulator of g ...    29   5.4  
U41030-2|AAA82363.2|  191|Caenorhabditis elegans Neuronal calciu...    29   5.4  
L33680-1|AAA85631.1|  191|Caenorhabditis elegans neuronal calciu...    29   5.4  
AL117204-6|CAB55149.2|  833|Caenorhabditis elegans Hypothetical ...    28   7.2  
AF077542-8|AAC26300.2|  342|Caenorhabditis elegans Serpentine re...    28   9.5  

>Z46793-3|CAA86772.1|  172|Caenorhabditis elegans Hypothetical
           protein C56G7.1 protein.
          Length = 172

 Score =  125 bits (301), Expect = 5e-29
 Identities = 64/146 (43%), Positives = 94/146 (64%), Gaps = 4/146 (2%)
 Frame = -2

Query: 736 NVFXMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASG- 560
           NVF MF Q Q+ EFKEAF ++D ++DG I + DL+  F SLG+  +E+ +D M+ EA G 
Sbjct: 19  NVFAMFDQAQIQEFKEAFNMIDQNRDGFIDQEDLKDMFASLGKEVTEQFIDSMINEAPGA 78

Query: 559 -PINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWGDKFSAD 389
            PINFT  LTLF  +++ G+D ++V+ NAF+ FDE+  GK++ E LR  L T G+++S +
Sbjct: 79  QPINFTMFLTLFGEKLT-GTDPEEVIRNAFQCFDEDNSGKLNEEHLRELLTTMGERYSEE 137

Query: 388 EVDEAYDQMDIDDKGYIDTTKLIAML 311
           +VDE +    I   G  D  +   ML
Sbjct: 138 QVDELFRDAPIKG-GQFDYVEFTRML 162


>Z34801-8|CAA84331.1|  172|Caenorhabditis elegans Hypothetical
           protein C56G7.1 protein.
          Length = 172

 Score =  125 bits (301), Expect = 5e-29
 Identities = 64/146 (43%), Positives = 94/146 (64%), Gaps = 4/146 (2%)
 Frame = -2

Query: 736 NVFXMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASG- 560
           NVF MF Q Q+ EFKEAF ++D ++DG I + DL+  F SLG+  +E+ +D M+ EA G 
Sbjct: 19  NVFAMFDQAQIQEFKEAFNMIDQNRDGFIDQEDLKDMFASLGKEVTEQFIDSMINEAPGA 78

Query: 559 -PINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWGDKFSAD 389
            PINFT  LTLF  +++ G+D ++V+ NAF+ FDE+  GK++ E LR  L T G+++S +
Sbjct: 79  QPINFTMFLTLFGEKLT-GTDPEEVIRNAFQCFDEDNSGKLNEEHLRELLTTMGERYSEE 137

Query: 388 EVDEAYDQMDIDDKGYIDTTKLIAML 311
           +VDE +    I   G  D  +   ML
Sbjct: 138 QVDELFRDAPIKG-GQFDYVEFTRML 162


>M23365-1|AAA28113.1|  170|Caenorhabditis elegans myosin light chain
           1 protein.
          Length = 170

 Score =  107 bits (256), Expect = 1e-23
 Identities = 58/141 (41%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
 Frame = -2

Query: 721 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINFTQ 542
           F QK + EFKEAF +MD +KDGII K+DL+  + S+G++A + ++D M+ EASGPINFT 
Sbjct: 21  FDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTV 80

Query: 541 LLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMT-WGDKFSADEVDEAY 371
            LTLF  R++ G+D +  +I AF  FD++  GKI  + L   L    G+    DEV   Y
Sbjct: 81  FLTLFGERLT-GTDPEATIIGAFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMY 139

Query: 370 DQMDIDDKGYIDTTKLIAMLT 308
                 + G +D      ++T
Sbjct: 140 KGKPPIEGGEVDYKAFAHLIT 160


>AC024089-6|AAK09070.2|  170|Caenorhabditis elegans Myosin light
           chain protein 1 protein.
          Length = 170

 Score =  107 bits (256), Expect = 1e-23
 Identities = 58/141 (41%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
 Frame = -2

Query: 721 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINFTQ 542
           F QK + EFKEAF +MD +KDGII K+DL+  + S+G++A + ++D M+ EASGPINFT 
Sbjct: 21  FDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTV 80

Query: 541 LLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMT-WGDKFSADEVDEAY 371
            LTLF  R++ G+D +  +I AF  FD++  GKI  + L   L    G+    DEV   Y
Sbjct: 81  FLTLFGERLT-GTDPEATIIGAFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMY 139

Query: 370 DQMDIDDKGYIDTTKLIAMLT 308
                 + G +D      ++T
Sbjct: 140 KGKPPIEGGEVDYKAFAHLIT 160


>M23366-1|AAA28114.1|  170|Caenorhabditis elegans myosin light chain
           2 protein.
          Length = 170

 Score =  106 bits (255), Expect = 2e-23
 Identities = 57/141 (40%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
 Frame = -2

Query: 721 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINFTQ 542
           F QK + EFKEAF +MD +KDGII K+DL+  + S+G++A + ++D M+ EASGPINFT 
Sbjct: 21  FDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTV 80

Query: 541 LLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMT-WGDKFSADEVDEAY 371
            LTLF  R++ G+D +  ++ AF  FD++  GKI  + L   L    G+    DEV   Y
Sbjct: 81  FLTLFGERLT-GTDPEATIVGAFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMY 139

Query: 370 DQMDIDDKGYIDTTKLIAMLT 308
                 + G +D      ++T
Sbjct: 140 KGKPPIEGGEVDYKAFAHLIT 160


>AC024089-5|AAK09069.1|  170|Caenorhabditis elegans Myosin light
           chain protein 2 protein.
          Length = 170

 Score =  106 bits (255), Expect = 2e-23
 Identities = 57/141 (40%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
 Frame = -2

Query: 721 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINFTQ 542
           F QK + EFKEAF +MD +KDGII K+DL+  + S+G++A + ++D M+ EASGPINFT 
Sbjct: 21  FDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTV 80

Query: 541 LLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMT-WGDKFSADEVDEAY 371
            LTLF  R++ G+D +  ++ AF  FD++  GKI  + L   L    G+    DEV   Y
Sbjct: 81  FLTLFGERLT-GTDPEATIVGAFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMY 139

Query: 370 DQMDIDDKGYIDTTKLIAMLT 308
                 + G +D      ++T
Sbjct: 140 KGKPPIEGGEVDYKAFAHLIT 160


>AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin
           protein.
          Length = 149

 Score =  101 bits (241), Expect = 8e-22
 Identities = 52/143 (36%), Positives = 84/143 (58%), Gaps = 6/143 (4%)
 Frame = -2

Query: 718 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPIN 551
           +++Q+AEFKEAF L D D DG I   +L     SLG+  +E EL +M+ E     +G I+
Sbjct: 6   TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65

Query: 550 FTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDE 377
           F + LT+ A +M   +D ++ +  AF+ FD++G   I +  LRH +   G+K + +EVDE
Sbjct: 66  FPEFLTMMARKMK-DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124

Query: 376 AYDQMDIDDKGYIDTTKLIAMLT 308
              + DID  G ++  + + M+T
Sbjct: 125 MIREADIDGDGQVNYEEFVTMMT 147


>AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin
           protein 1 protein.
          Length = 149

 Score =  101 bits (241), Expect = 8e-22
 Identities = 52/143 (36%), Positives = 84/143 (58%), Gaps = 6/143 (4%)
 Frame = -2

Query: 718 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPIN 551
           +++Q+AEFKEAF L D D DG I   +L     SLG+  +E EL +M+ E     +G I+
Sbjct: 6   TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65

Query: 550 FTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDE 377
           F + LT+ A +M   +D ++ +  AF+ FD++G   I +  LRH +   G+K + +EVDE
Sbjct: 66  FPEFLTMMARKMK-DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124

Query: 376 AYDQMDIDDKGYIDTTKLIAMLT 308
              + DID  G ++  + + M+T
Sbjct: 125 MIREADIDGDGQVNYEEFVTMMT 147


>Z70034-1|CAA93852.2|  171|Caenorhabditis elegans Hypothetical
           protein C18E9.1 protein.
          Length = 171

 Score = 81.8 bits (193), Expect = 5e-16
 Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 6/148 (4%)
 Frame = -2

Query: 730 FXMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----AS 563
           F   +++++ E+K AF+L D D +G I   +L     SLG+  +E+EL +MV E     S
Sbjct: 26  FDGLNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGS 85

Query: 562 GPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSAD 389
           G I+F +   +   RM+  +D  +++  AF+ FD +G   I ++  R+ +   GD+FS  
Sbjct: 86  GTIDFGEFCQMM-KRMNKEND-SEMIREAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQ 143

Query: 388 EVDEAYDQMDIDDKGYIDTTKLIAMLTA 305
           EVDE   ++DID  G ID  +  +  +A
Sbjct: 144 EVDEIIAEIDIDGDGQIDYEEFASTFSA 171


>AJ512489-1|CAD54672.1|  171|Caenorhabditis elegans calmodulin-like
           protein protein.
          Length = 171

 Score = 81.8 bits (193), Expect = 5e-16
 Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 6/148 (4%)
 Frame = -2

Query: 730 FXMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----AS 563
           F   +++++ E+K AF+L D D +G I   +L     SLG+  +E+EL +MV E     S
Sbjct: 26  FDGLNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGS 85

Query: 562 GPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSAD 389
           G I+F +   +   RM+  +D  +++  AF+ FD +G   I ++  R+ +   GD+FS  
Sbjct: 86  GTIDFGEFCQMM-KRMNKEND-SEMIREAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQ 143

Query: 388 EVDEAYDQMDIDDKGYIDTTKLIAMLTA 305
           EVDE   ++DID  G ID  +  +  +A
Sbjct: 144 EVDEIIAEIDIDGDGQIDYEEFASTFSA 171


>Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical
           protein C13C12.1 protein.
          Length = 218

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 42/149 (28%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
 Frame = -2

Query: 736 NVFXMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE---- 569
           ++    + +++ EF+EAF + D D +G I   +L     SLG+  +E+E+ EM+ E    
Sbjct: 70  DIIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDID 129

Query: 568 ASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFS 395
            +G I F +   +    M     + +++  AF+ FD++G   I ++  R+ ++  G +FS
Sbjct: 130 GNGQIEFPEFCVMMKRMMK--ETDSEMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFS 187

Query: 394 ADEVDEAYDQMDIDDKGYIDTTKLIAMLT 308
            +EVDE   ++D+D  G ID  + + M++
Sbjct: 188 EEEVDEMIKEVDVDGDGEIDYEEFVKMMS 216


>X04259-1|CAA27814.1|  161|Caenorhabditis elegans cal-1 protein.
          Length = 161

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 42/149 (28%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
 Frame = -2

Query: 736 NVFXMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE---- 569
           ++    + +++ EF+EAF + D D +G I   +L     SLG+  +E+E+ EM+ E    
Sbjct: 13  DIIKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDID 72

Query: 568 ASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFS 395
            +G I F +   +    M     + +++  AF+ FD++G   I ++  R+ ++  G +FS
Sbjct: 73  GNGQIEFPEFCVMMKRMMK--ETDSEMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFS 130

Query: 394 ADEVDEAYDQMDIDDKGYIDTTKLIAMLT 308
            +EVDE   ++D+D  G ID  + + M++
Sbjct: 131 EEEVDEMIKEVDVDGDGEIDYEEFVKMMS 159


>Z82282-1|CAB05271.1|  182|Caenorhabditis elegans Hypothetical
           protein T07G12.1 protein.
          Length = 182

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 43/143 (30%), Positives = 78/143 (54%), Gaps = 6/143 (4%)
 Frame = -2

Query: 721 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPI 554
           F+ +++ EF +AF+L D D +  +   +L      LG   +E+EL  MV E     +G I
Sbjct: 17  FTPEELQEFAQAFKLFDKDGNNTMNIKELGEAMRMLGLNPTEEELLNMVNEYDVDGNGKI 76

Query: 553 NFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVD 380
           +F +   +    M+  +D++ + + AFK FD++G   I ++  +H + T G++FS +EVD
Sbjct: 77  DFGEFCKMM-KEMNKETDQELIRL-AFKVFDKDGNGYITAQEFKHFMTTMGERFSEEEVD 134

Query: 379 EAYDQMDIDDKGYIDTTKLIAML 311
           E   ++D D    ID  + + M+
Sbjct: 135 EIIREVDKDGDEQIDLDEFVNMV 157


>Z81053-2|CAB02878.2|  202|Caenorhabditis elegans Hypothetical
           protein E02A10.3 protein.
          Length = 202

 Score = 65.3 bits (152), Expect = 5e-11
 Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
 Frame = -2

Query: 721 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPI 554
           +S++++ E+++ F + D D+ G I  ++L A   +LG   +  ELD+++ E     +  I
Sbjct: 50  YSEEELQEYRQVFNMFDADRSGAIAIDELEAAIKNLGLEQTRDELDKIIDEVDQRGNHQI 109

Query: 553 NFTQLLTLFANRMSGGSDEDDVVINAFKTFD--EEGKIDSERLRHALMTWGDKFSADEVD 380
           +F +   +        S+ ++VV   F  FD  E G I  +  R  L   GD      +D
Sbjct: 110 DFDEFCVVMRRLTMKKSNWNEVVKECFTVFDRSENGGISKKDFRFILRELGDITDNQIID 169

Query: 379 EAYDQMDIDDKGYIDTTKLIAML 311
           E +++ D+D  G ID  +   M+
Sbjct: 170 EIFNEADVDGNGVIDYDEFTYMV 192


>U70851-8|AAB09131.1|  164|Caenorhabditis elegans Calmodulin related
           genes protein 3 protein.
          Length = 164

 Score = 63.7 bits (148), Expect = 2e-10
 Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 6/148 (4%)
 Frame = -2

Query: 733 VFXMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVG----EA 566
           V    +++++ EFKEAF L D D +G I   +L     +LG+  +E+++ E++     + 
Sbjct: 19  VISQLTEEEIHEFKEAFLLFDKDGNGTISIKELGVAMRALGQNPTEQQMMEIIHDVDLDG 78

Query: 565 SGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSA 392
           +G + F +   +    M     + +++  AFK FD +G   I +   +  ++  G  F  
Sbjct: 79  NGQVEFPEFCVMMKRIMK--ETDSEMIREAFKIFDRDGNGVITANEFKLFMINMGMCFDE 136

Query: 391 DEVDEAYDQMDIDDKGYIDTTKLIAMLT 308
            EV+E  +++D D  G ID  + + + +
Sbjct: 137 VEVEEMMNEVDCDGNGEIDYEEFVKIFS 164


>AC084159-17|AAK39364.1|  116|Caenorhabditis elegans Hypothetical
           protein Y73B3A.12 protein.
          Length = 116

 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
 Frame = -2

Query: 589 LDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALM 416
           ++E+  + +G I+F + LT+ A +M G +D ++ +  AF+ FD++G   I +  LRH + 
Sbjct: 2   INEVDADGNGTIDFPEFLTVMARKMKG-TDSEEEIREAFRVFDKDGNGFISAAELRHVMT 60

Query: 415 TWGDKFSADEVDEAYDQMDIDDKGYI 338
             G+K + +EVDE   + DID  G I
Sbjct: 61  NLGEKLTDEEVDEMIREADIDGDGQI 86



 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 18/45 (40%), Positives = 29/45 (64%)
 Frame = -2

Query: 700 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 566
           E +EAF++ D D +G I   +LR    +LG   +++E+DEM+ EA
Sbjct: 34  EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 78


>U28740-5|AAA68320.1|  229|Caenorhabditis elegans Hypothetical
           protein B0563.7 protein.
          Length = 229

 Score = 54.8 bits (126), Expect = 7e-08
 Identities = 29/144 (20%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
 Frame = -2

Query: 721 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPI 554
           +++K++ E+++ F + D D  G IG  +L+    S+G  A++ E+D ++ E     +G I
Sbjct: 45  YTRKELKEYRQLFNMFDTDGSGAIGNEELKQAMISIGLHANKAEIDNVIKEVDADGNGEI 104

Query: 553 NFTQLLTLFANRMS-GGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWGDKFSADEV 383
           +F +         +   S  ++++   F+ FD++  G I     ++    +GD F  +  
Sbjct: 105 DFEEFCACMKKSQNIVKSTNEELIRECFEIFDQDRNGIITENEFKYIAKEFGD-FDDELA 163

Query: 382 DEAYDQMDIDDKGYIDTTKLIAML 311
           ++ + ++D+   G++   +   ++
Sbjct: 164 EKVFRELDVSANGHLSADQFATIV 187


>U28731-1|AAA68298.1|  145|Caenorhabditis elegans Hypothetical
           protein F12A10.5 protein.
          Length = 145

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
 Frame = -2

Query: 703 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLL 536
           AE +E F+  D + DG I + +L      LG  AS  +++ M+ +A    +G I+  + L
Sbjct: 7   AEIREVFREFDKNGDGRITRQELEVALLQLGEKASNSKIETMIEQADLDGNGCIDIDEFL 66

Query: 535 TLFANRMSGGSDEDDVVINAFKTFDE--EGKIDSERLRHALMTWGDKFSADEVDEAYDQM 362
            +   ++    +E ++  + F  FD+  +G I  + L   +   G+K +  E  E   Q 
Sbjct: 67  NVLRRQICDPKEERELR-DVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIKQG 125

Query: 361 DIDDKGYIDTTKLIAML 311
           D+D  G ID  + + ++
Sbjct: 126 DLDHDGMIDFQEFVNII 142



 Score = 33.5 bits (73), Expect = 0.19
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
 Frame = -2

Query: 712 KQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFT 545
           K+  E ++ F + D + DG+I  +DL      LG   +E E  EM+ +      G I+F 
Sbjct: 77  KEERELRDVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIKQGDLDHDGMIDFQ 136

Query: 544 QLLTL 530
           + + +
Sbjct: 137 EFVNI 141


>U40423-5|AAA81454.2|  156|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 2 protein.
          Length = 156

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
 Frame = -2

Query: 700 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLT 533
           + K  F+  D + DG I + +LRA    +G+  +E ELD M   A     G I+F + L 
Sbjct: 22  DLKGIFREFDLNGDGYIQREELRAVMQKMGQSPTEDELDAMFQAADKDCDGNIDFQEFLV 81

Query: 532 LF-ANRMSGGSDEDDVVINAFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYDQMDI 356
           +  AN +S        V       D +G I    LR A    G   S  ++   Y  +D 
Sbjct: 82  IAKANPLSLSL---KAVFEELDV-DGDGYITRSELRTAFQRMGHSLSDQDIKAIYRHVDQ 137

Query: 355 DDKGYIDTTKLIAMLT 308
           ++ G I+  +   M+T
Sbjct: 138 NNDGKINFQEFCEMMT 153


>Z48585-7|CAA88482.1|  160|Caenorhabditis elegans Hypothetical
           protein ZK673.7 protein.
          Length = 160

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
 Frame = -2

Query: 700 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLT 533
           E +EAF+L D + +G I  +DLR    +L    SE+ELDEM+ E     SG ++F + + 
Sbjct: 96  ELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFME 155

Query: 532 LFA 524
           + +
Sbjct: 156 MMS 158


>AB079299-1|BAB84566.1|  160|Caenorhabditis elegans troponin C
           protein.
          Length = 160

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
 Frame = -2

Query: 700 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLT 533
           E +EAF+L D + +G I  +DLR    +L    SE+ELDEM+ E     SG ++F + + 
Sbjct: 96  ELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFME 155

Query: 532 LFA 524
           + +
Sbjct: 156 MMS 158


>U00050-10|AAA50701.1|  153|Caenorhabditis elegans Myosin light
           chain protein 3, isoforma protein.
          Length = 153

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 14/144 (9%)
 Frame = -2

Query: 694 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGP---------INFTQ 542
           KE F L D + DG I    +      + R A  K    MV +A+G          + F +
Sbjct: 10  KEIFNLYDEELDGKIDGTQV----GDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEE 65

Query: 541 LLTLF---ANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWGDKFSADEVDE 377
            L ++   A     G+  D       K FD+E  GKI +  LRH L+  G++ SADE DE
Sbjct: 66  WLPMYEQLAKEKEQGTYAD--FYEGLKVFDKEETGKILAAELRHILLALGERLSADEADE 123

Query: 376 AYDQMDIDDKGYIDTTKLIAMLTA 305
               ++ D +G +     I  + A
Sbjct: 124 LLKGVE-DGEGMVKYEDFIKKVLA 146


>L03412-1|AAA28112.1|  153|Caenorhabditis elegans alkali myosin
           light chain protein.
          Length = 153

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 14/144 (9%)
 Frame = -2

Query: 694 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGP---------INFTQ 542
           KE F L D + DG I    +      + R A  K    MV +A+G          + F +
Sbjct: 10  KEIFNLYDEELDGKIDGTQV----GDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEE 65

Query: 541 LLTLF---ANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWGDKFSADEVDE 377
            L ++   A     G+  D       K FD+E  GKI +  LRH L+  G++ SADE DE
Sbjct: 66  WLPMYEQLAKEKEQGTYAD--FYEGLKVFDKEETGKILAAELRHILLALGERLSADEADE 123

Query: 376 AYDQMDIDDKGYIDTTKLIAMLTA 305
               ++ D +G +     I  + A
Sbjct: 124 LLKGVE-DGEGMVKYEDFIKKVLA 146


>Z81120-4|CAB03346.1|  142|Caenorhabditis elegans Hypothetical
           protein T12D8.6 protein.
          Length = 142

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
 Frame = -2

Query: 706 VAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVG--EASGPINFTQLLT 533
           +A+ +E F   D   D  I    +     +LG+  +E E+ + VG  +    ++F   + 
Sbjct: 4   LADCREVFAYFDSKGDERISVQQVGDVLRALGQNPTEAEIHKCVGSFDREARLSFEDFVP 63

Query: 532 LFANRMSGGSDEDDV--VINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDE 377
           +F + +S   ++  V   +     FD+EG   I+   LRH L T G++ S ++VD+
Sbjct: 64  IFQS-VSKNREKHTVEEFVEGLSHFDKEGNGMINVAELRHLLTTLGERLSDEDVDQ 118


>Z70753-8|CAA94763.1|  137|Caenorhabditis elegans Hypothetical
           protein F40F9.8 protein.
          Length = 137

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 6/121 (4%)
 Frame = -2

Query: 679 LMDHDKDGIIGKNDLRATFDSLGRLASEKEL---DEMVGEASGPINFTQLLTLFANRMSG 509
           + D D DG+I  +D+     S G   S+ EL    E   + +G ++F  LL      +  
Sbjct: 1   MFDEDSDGLIETDDVSHVLRSFGLNPSQTELQLVSEQTAKKNGRVSFDDLLPRVVLAIQN 60

Query: 508 GSDEDDV---VINAFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYI 338
              +DD    +  AF+       +  + L   L + G+  +  EV +  + + I   G I
Sbjct: 61  EEWKDDTPKQIHAAFQVITSNNYVQKDTLLQLLTSIGEPLTPQEVKQFLNHVSIRANGDI 120

Query: 337 D 335
           D
Sbjct: 121 D 121


>AL110490-6|CAB54442.2|  687|Caenorhabditis elegans Hypothetical
           protein Y48B6A.6a protein.
          Length = 687

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
 Frame = -2

Query: 730 FXMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASE---KELDEMVGE-AS 563
           F  FS+KQ+  F   F+  D D+D  I  N+L+   + LG   +    KEL + V E   
Sbjct: 535 FSEFSRKQIQYFSGIFKKYDEDQDSYIDFNELKRMMEKLGEAQTHIALKELIKKVDEDQD 594

Query: 562 GPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGKIDSE 437
           G I+  +   +F    SG     +V    FKT  E   +  E
Sbjct: 595 GKISQREFFLIFRLAASGELSCSEV----FKTLAESVDVSKE 632


>U40427-2|AAA81468.2|  159|Caenorhabditis elegans Hypothetical
           protein F43C9.2 protein.
          Length = 159

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 28/136 (20%), Positives = 59/136 (43%), Gaps = 6/136 (4%)
 Frame = -2

Query: 700 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLT 533
           +  E F L+D DKDG + +N++ A   ++    +  ELD + GE     +G I+  + + 
Sbjct: 23  QLSETFDLLDVDKDGRLSRNEIAALLRTINVEPTRVELDFIFGEMDTDKTGKISKEEFVN 82

Query: 532 LFANRMSGGSDEDDVVINAFKTFDE--EGKIDSERLRHALMTWGDKFSADEVDEAYDQMD 359
              +     +   ++ +  F+ FD   +G I  + +   L    D      + + +   D
Sbjct: 83  YMKSPPIHRTTLRELEVQ-FRKFDSDGDGAITEDEMAEILRRTADLGDRAAISDMFKATD 141

Query: 358 IDDKGYIDTTKLIAML 311
           ++  G I   + + M+
Sbjct: 142 LNGDGKITFFEFVKMM 157


>U41625-3|AAA83326.1|  264|Caenorhabditis elegans Hypothetical
           protein K03A1.4a protein.
          Length = 264

 Score = 35.9 bits (79), Expect = 0.036
 Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 8/134 (5%)
 Frame = -2

Query: 715 QKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMV----GEASGPINF 548
           + ++ E+K AF   D + DG I  ++L       G+  ++ EL  ++     + +G I F
Sbjct: 124 KNKIEEYKRAFNFFDANNDGRITIDELEKAMQKCGQKPTKLELRLIMYHGDNDQNGVITF 183

Query: 547 TQLLTLFANRMSGGSDEDDVVINAFKTF--DEEGKIDSERLRHAL--MTWGDKFSADEVD 380
            +   L     S      D +   F  F  D++G I+   +   +  ++    F    V+
Sbjct: 184 DEFAHLMNGTASMNQYTYDQLREQFDMFDKDKDGFIEKMEMLSIVRELSLQASFPRQVVE 243

Query: 379 EAYDQMDIDDKGYI 338
           + +++ DID  G I
Sbjct: 244 QLFNEADIDGDGKI 257


>AF098504-1|AAC67412.1|  364|Caenorhabditis elegans Btb and math
           domain containingprotein 25 protein.
          Length = 364

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = -2

Query: 712 KQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 566
           K   E ++ FQ +D D DG I   +L+A   +L    +E+E+D+ +  A
Sbjct: 276 KTEEEIRKVFQDLDKDGDGFISVAELQAVMTNLQAWLTEEEIDDGIRSA 324


>U97405-6|AAB53013.2|  142|Caenorhabditis elegans Hypothetical
           protein T09B4.4 protein.
          Length = 142

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
 Frame = -2

Query: 721 FSQKQVAEFKEAFQLMDHDKDGII-GKNDLRATFDSLGRLASEKELDEMVGEAS-GPINF 548
           FSQKQ+ E +E F    +   G++   + LR    SLG   +  + D    + +  PI F
Sbjct: 5   FSQKQIDEIRECFNF--YSTSGVLRTDSQLRCALRSLGYSPTASKTDIYFKKLNKKPIEF 62

Query: 547 TQLLTLFANRMSGGSDEDDVVINAFKTFD--EEGKIDSERLRHALMTWGDKFSADEVDEA 374
              L +  +  +  +   + +I A    D  +   + S  L   L   G++ S +E+   
Sbjct: 63  ATFLDICKDEQNSPNPLTE-IIKALSGLDRNKTRAMPSRELAAILSHVGEQMSPEEIKYL 121

Query: 373 YDQMDID 353
             +++++
Sbjct: 122 LSKVEVN 128


>Z82256-6|CAB05117.2|  616|Caenorhabditis elegans Hypothetical
           protein B0513.5 protein.
          Length = 616

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -2

Query: 460 EEGKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYID 335
           +EG++ S+     L   G K   + V + +D++D D  G +D
Sbjct: 283 QEGRLTSQEFYKRLGELGVKTDTESVKKFFDEVDFDSDGIVD 324


>AL132902-14|CAE18021.2|  758|Caenorhabditis elegans Hypothetical
           protein Y71A12B.15 protein.
          Length = 758

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -2

Query: 451 KIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKL 323
           K +S  L  A++T+GD F+   VD     +DID   ++ T KL
Sbjct: 34  KFNSVELTSAMLTYGDLFNVTIVDLRSISIDIDLVKFLYTQKL 76


>Z83125-3|CAB05626.1|  424|Caenorhabditis elegans Hypothetical
           protein T15D6.4 protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = -2

Query: 553 NFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGKIDSERLRHALM 416
           NF +++   ANRM  G ++  +V+  F+T + E  ++ + L   L+
Sbjct: 171 NFAKMVKPVANRMIDGMNKQVLVVRRFETNETELPLNLDELEQGLL 216


>Z29094-3|CAA82343.1|  358|Caenorhabditis elegans Hypothetical
           protein C07A9.5 protein.
          Length = 358

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)
 Frame = -2

Query: 718 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLG-RLASEKELDEMVG--EASGPINF 548
           ++KQ+ EFK AF   D +K+G +          S G   + E  L E +   + S     
Sbjct: 227 TEKQLHEFKLAFDYFDQEKNGWLDYEHFELCLKSQGYNFSVESTLKETMSLLDPSTYEKH 286

Query: 547 TQLLTLFANRMSGGSDEDDVVINAFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYD 368
             +  +  +  +   D+   + +A K  D   KI     R     +  K  A + + + D
Sbjct: 287 DYMRYMVKHETTNILDDHSAIEDALKNLDAR-KISDSMSRKEAEFFMSKI-AKKAETSSD 344

Query: 367 QMDIDDKGYIDT 332
           Q+ ++ K ++++
Sbjct: 345 QVCLEYKDFVNS 356


>U46669-3|AAA85744.2|  737|Caenorhabditis elegans Regulator of g
           protein signalingprotein 6 protein.
          Length = 737

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -3

Query: 282 VKPRNDSISTIRSKTPAAVITPGHGS 205
           +KPR+D I T  + TP AV T  +GS
Sbjct: 582 LKPRSDDIPTTSTSTPMAVETKPNGS 607


>U41030-2|AAA82363.2|  191|Caenorhabditis elegans Neuronal calcium
           sensor familyprotein 1 protein.
          Length = 191

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -2

Query: 688 AFQLMDHDKDGIIGKNDLRATFDSLGRL-ASEKELDE 581
           AF+L D D+DG I +N++ +  DS+ ++  S  +L E
Sbjct: 104 AFKLYDLDQDGFITRNEMLSIVDSIYKMVGSSVQLPE 140


>L33680-1|AAA85631.1|  191|Caenorhabditis elegans neuronal calcium
           binding protein protein.
          Length = 191

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -2

Query: 688 AFQLMDHDKDGIIGKNDLRATFDSLGRL-ASEKELDE 581
           AF+L D D+DG I +N++ +  DS+ ++  S  +L E
Sbjct: 104 AFKLYDLDQDGFITRNEMLSIVDSIYKMVGSSVQLPE 140


>AL117204-6|CAB55149.2|  833|Caenorhabditis elegans Hypothetical
           protein Y116A8C.13 protein.
          Length = 833

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = -2

Query: 532 LFANRMSGGSDEDDVVINAFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYD 368
           +  N M    D DDVV N  +  D+ GKID            ++  AD  DE  +
Sbjct: 710 MLENEMDEEDDGDDVVENDAEKIDKSGKIDKIDSDDDEEADDEELEADVTDEVVE 764


>AF077542-8|AAC26300.2|  342|Caenorhabditis elegans Serpentine
           receptor, class z protein64 protein.
          Length = 342

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = -3

Query: 180 TKLFYFNFLHT**FIVSNFYLFIYNENIVLLLPNCATV*LKWDSVECYVFIILILPI 10
           T +FY   + T  F+V   Y+F  +  +  +LPN +     + S+  Y F +L+L +
Sbjct: 68  TNVFYKMVIFTL-FVVVAKYIFFISFQVFAVLPNMSETIYSYVSLFAYEFCLLLLRV 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,086,315
Number of Sequences: 27780
Number of extensions: 285353
Number of successful extensions: 998
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -