Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_B12
(872 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4 |Schiz... 266 2e-72
SPBC211.02c |cwf3|syf1|complexed with Cdc5 protein Cwf3 |Schizos... 45 1e-05
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 44 3e-05
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 41 2e-04
SPBC4B4.09 |usp105|prp39|U1 snRNP-associated protein Usp105|Schi... 40 3e-04
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 33 0.040
SPCC1672.03c |||guanine deaminase |Schizosaccharomyces pombe|chr... 33 0.070
SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein 5|... 32 0.12
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 32 0.12
SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificit... 31 0.16
SPAC1687.20c |mis6||inner centromere protein Mis6|Schizosaccharo... 30 0.37
SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 29 0.65
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 29 1.1
SPAC688.13 |scn1||TatD DNase family Scn1|Schizosaccharomyces pom... 29 1.1
SPAC1250.04c |atl1||alkyltransferase-like protein Atl1|Schizosac... 28 2.0
SPBC244.02c |||U3 snoRNP-associated protein Utp6 |Schizosaccharo... 27 2.6
SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit Alp... 27 3.5
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 26 6.1
SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe... 26 6.1
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 26 8.1
SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit Gsa1... 26 8.1
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 26 8.1
>SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 674
Score = 266 bits (653), Expect = 2e-72
Identities = 136/279 (48%), Positives = 185/279 (66%), Gaps = 13/279 (4%)
Frame = -3
Query: 870 IPHKIFTFSKIWLMYAQFEVRCKDLKQARKTLGMALGMCPRDKLYRGYIDLEIQLREFDR 691
IPHK FTF+K+WLMYA FE+R + + ARKTLG ALGMCP+ KL+RGYI+ E +++FDR
Sbjct: 393 IPHKKFTFAKLWLMYAMFELRQRKIDVARKTLGRALGMCPKPKLFRGYIEFEDAIKQFDR 452
Query: 690 CRILYQKFLEYGPENCVTWIKFAELETLLGDTDRARAIYEIAVGQQRLDMPELLWKSYID 511
CRILY+K++ Y PE C W+ +A LET LGD+DRARA+Y +AV Q L+ PEL+WK+YID
Sbjct: 453 CRILYEKWILYDPEACAPWLGYAALETKLGDSDRARALYNLAVNQPILETPELVWKAYID 512
Query: 510 FEVSQGETEKARQLYERLLERTVHVKVWLSYAKFEL-----------NAENADNINVELA 364
FE + E KAR +Y++LL HVKVW+S+A FE+ N E A V A
Sbjct: 513 FEFEEMEYGKARSIYQQLLRTAPHVKVWISFANFEIAHLEDDDEEPPNEEVASPTAVVRA 572
Query: 363 RRVYERANDSLRSAGEKESRVLLLEAWKEFETEIGDEVKLEKVLAKMPRRVKKRQKIISE 184
R V+E A LR G KE RV+LLEAWK+FE G E + V + MP+ VKKR+++ E
Sbjct: 573 RNVFENALAHLRQQGLKEERVVLLEAWKQFEAMHGTEDTRKHVSSLMPQVVKKRRRL--E 630
Query: 183 AGVEEGWEEVFDYIFPEDEMVRPN--LKLLAAAKNWRKQ 73
G +EE DY+FP+ + + K+L ++ W+++
Sbjct: 631 DG---SFEEYLDYLFPDTATDQGDKMRKMLELSRKWKEE 666
Score = 81.4 bits (192), Expect = 2e-16
Identities = 62/234 (26%), Positives = 118/234 (50%), Gaps = 10/234 (4%)
Frame = -3
Query: 852 TFSKIWLMYAQFEVRCKDLKQARKTLGMALGMCPR-DKLYRGYIDLEIQLREFDRCRILY 676
T+ +WL Y + E++ +++ AR A+ PR DKL+ Y+ +E L CR ++
Sbjct: 102 TYIPLWLKYIECEMKNRNINHARNLFDRAVTQLPRVDKLWYKYVYMEEMLGNITGCRQVF 161
Query: 675 QKFLEYGP-ENCVTWIKFAELETLLGDTDRARAIYEIAVGQQRLDMPELL-WKSYIDFEV 502
+++L++ P ENC W+ + +E + +RAR IYE V + PE+ W + FE
Sbjct: 162 ERWLKWEPDENC--WMSYIRMERRYHENERARGIYERFV----VVHPEVTNWLRWARFEE 215
Query: 501 SQGETEKARQLY----ERLLERTVHVKVWLSYAKFELNAENADNINVELARRVYERANDS 334
G RQ+Y + L + ++ + ++++AKFE+ ++ YERA
Sbjct: 216 ECGNAANVRQVYLAAIDALGQEFLNERFFIAFAKFEIR------------QKEYERARTI 263
Query: 333 LRSAGEKESRVLLLEAWKE---FETEIGDEVKLEKVLAKMPRRVKKRQKIISEA 181
+ A + R +E +KE FE + GD + +E + + +R + +K++ ++
Sbjct: 264 FKYAIDFMPRSKSMELYKEYTHFEKQFGDHLGVESTV--LDKRRLQYEKLLKDS 315
Score = 77.4 bits (182), Expect = 2e-15
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 1/170 (0%)
Frame = -3
Query: 837 WLMYAQFEVRCKDLKQARKTLGMALGM-CPRDKLYRGYIDLEIQLREFDRCRILYQKFLE 661
W+ Y Q+E+ K+ +AR AL + L+ YI+ E++ R + R L+ + +
Sbjct: 73 WMRYGQWELDQKEFARARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRAVT 132
Query: 660 YGPENCVTWIKFAELETLLGDTDRARAIYEIAVGQQRLDMPELLWKSYIDFEVSQGETEK 481
P W K+ +E +LG+ R ++E + + + E W SYI E E E+
Sbjct: 133 QLPRVDKLWYKYVYMEEMLGNITGCRQVFERWL---KWEPDENCWMSYIRMERRYHENER 189
Query: 480 ARQLYERLLERTVHVKVWLSYAKFELNAENADNINVELARRVYERANDSL 331
AR +YER + V WL +A+FE NA N+ R+VY A D+L
Sbjct: 190 ARGIYERFVVVHPEVTNWLRWARFEEECGNAANV-----RQVYLAAIDAL 234
Score = 74.5 bits (175), Expect = 2e-14
Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 24/189 (12%)
Frame = -3
Query: 855 FTFSKIWLMYAQFEVRCKDLKQARKTLGMALGMCPRDK---LYRGYIDLEIQLRE----- 700
F + ++ +A+FE+R K+ ++AR A+ PR K LY+ Y E Q +
Sbjct: 238 FLNERFFIAFAKFEIRQKEYERARTIFKYAIDFMPRSKSMELYKEYTHFEKQFGDHLGVE 297
Query: 699 ---FDRCRILYQKFLEYGPENCVTWIKFAELETLLGDTDRARAIYEIAVGQQRLDMPELL 529
D+ R+ Y+K L+ P + TW+ +LE GD + R YE A+ + + +
Sbjct: 298 STVLDKRRLQYEKLLKDSPYDYDTWLDLLKLEESAGDINTIRETYEKAIAKVPEVVEKNA 357
Query: 528 WKSYIDF--------EVSQGETEKARQLYERLLERTVH-----VKVWLSYAKFELNAENA 388
W+ Y+ E+ + ++AR++Y+ L+ H K+WL YA FEL
Sbjct: 358 WRRYVYIWLNYCLFEEIDVKDVDRARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKI 417
Query: 387 DNINVELAR 361
D L R
Sbjct: 418 DVARKTLGR 426
>SPBC211.02c |cwf3|syf1|complexed with Cdc5 protein Cwf3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 790
Score = 45.2 bits (102), Expect = 1e-05
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Frame = -3
Query: 849 FSK-IWLMYAQFEVRCKDLKQARKTLGMALGMCPR-DKL-YRGYIDLEIQLRE-FDRCRI 682
FSK I+L+YA FE + K++ L A D+L + +++ L R
Sbjct: 587 FSKSIYLLYADFEEKFGKAKRSISILEKAADKVKTADRLAIYNVLLVKVALNYGVLATRT 646
Query: 681 LYQKFLEYGPENCVT--WIKFAELETLLGDTDRARAIYEIAVGQQRLD--MPELLWKSYI 514
+Y+K +E ++ V ++FAE+ET LG+ DRAR IY G Q D + WK++
Sbjct: 647 VYEKAIESLSDSEVKDMCLRFAEMETKLGEIDRARLIY--IHGSQYCDPRVETDYWKAWQ 704
Query: 513 DFEVSQGETEKARQLYERLLERTVHVK 433
+FE+ G E+ + R ++R+V K
Sbjct: 705 EFEIRYGNPEETVKEMLR-IKRSVQTK 730
Score = 39.5 bits (88), Expect = 6e-04
Identities = 52/233 (22%), Positives = 107/233 (45%), Gaps = 7/233 (3%)
Frame = -3
Query: 870 IPHK-IFTFSKIWLMYAQFEVRCKDLKQARKTLGMALGMCPRDKLYRGYID--LEIQLRE 700
+P+K + +++W+ +A+ E+R ++ ARK +G A+ PR K + + D L Q+R
Sbjct: 419 VPYKTVNELAQVWIDWAEMELRHQNFDAARKLIGDAV-HAPR-KSHISFFDESLSPQVRL 476
Query: 699 FDRCRILYQKFLEYGPENCVTWIKFAELETLLGDTDRARAIYEIAVGQQRLDMPELLWKS 520
+I W+ + +LE +G + R +Y+ V + ++ P+++ +
Sbjct: 477 HKSSKI---------------WMYYLDLEESVGTIETTRKLYD-RVFELKIATPQVV-VN 519
Query: 519 YIDFEVSQGETEKARQLYER---LLERTVHVKVWLSY-AKFELNAENADNINVELARRVY 352
Y + E + ++YER L V ++W Y KF + ++E R ++
Sbjct: 520 YANLLEENAYFEDSFKIYERGVALFSYPVAFELWNLYLTKF---VKRYQGTHMERTRDLF 576
Query: 351 ERANDSLRSAGEKESRVLLLEAWKEFETEIGDEVKLEKVLAKMPRRVKKRQKI 193
E+A L + S+ + L + +FE + G + +L K +VK ++
Sbjct: 577 EQA---LEGCPPEFSKSIYL-LYADFEEKFGKAKRSISILEKAADKVKTADRL 625
Score = 37.9 bits (84), Expect = 0.002
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 22/146 (15%)
Frame = -3
Query: 744 KLYRGYIDLEIQLREFDRCRILYQK--FLEYGPEN--CVTWIKFAELETLLGDTDRARAI 577
KL+ + + ++ RI+++K + Y N WI +AE+E + D AR +
Sbjct: 391 KLFSEFARFYENFDDLEQSRIIFEKATHVPYKTVNELAQVWIDWAEMELRHQNFDAARKL 450
Query: 576 YEIAVG----------------QQRLDMPELLWKSYIDFEVSQGETEKARQLYERLLERT 445
AV Q RL +W Y+D E S G E R+LY+R+ E
Sbjct: 451 IGDAVHAPRKSHISFFDESLSPQVRLHKSSKIWMYYLDLEESVGTIETTRKLYDRVFELK 510
Query: 444 VHV-KVWLSYAK-FELNAENADNINV 373
+ +V ++YA E NA D+ +
Sbjct: 511 IATPQVVVNYANLLEENAYFEDSFKI 536
Score = 25.8 bits (54), Expect = 8.1
Identities = 36/169 (21%), Positives = 72/169 (42%), Gaps = 4/169 (2%)
Frame = -3
Query: 696 DRCRILYQKFLEYGPENCVT--WIKFAELETLLGDTDRARAIYEIAVGQQRL-DMPELLW 526
+R R L+++ LE P ++ +A+ E G R+ +I E A + + D +
Sbjct: 570 ERTRDLFEQALEGCPPEFSKSIYLLYADFEEKFGKAKRSISILEKAADKVKTADRLAIYN 629
Query: 525 KSYIDFEVSQGETEKARQLYERLLERTVHVKVWLSYAKFELNAENADNIN-VELARRVYE 349
+ ++ G R +YE+ +E +V +F AE + ++ AR +Y
Sbjct: 630 VLLVKVALNYGVLA-TRTVYEKAIESLSDSEVKDMCLRF---AEMETKLGEIDRARLIYI 685
Query: 348 RANDSLRSAGEKESRVLLLEAWKEFETEIGDEVKLEKVLAKMPRRVKKR 202
+ E + +AW+EFE G+ + K + ++ R V+ +
Sbjct: 686 HGSQYCDPRVETD----YWKAWQEFEIRYGNPEETVKEMLRIKRSVQTK 730
>SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1690
Score = 44.0 bits (99), Expect = 3e-05
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Frame = -3
Query: 630 KFAELETLLGDTDRARAIYE--IAVGQQRLDMPELLWKSYIDFEVSQGETEKARQLYERL 457
KFA LE GD +R R I+E ++ +RLD LW ID E+ Q + R+L++RL
Sbjct: 1587 KFAILEFKNGDPERGRTIFEGLLSSYPKRLD----LWNVLIDMEMKQDDPSIVRRLFQRL 1642
Query: 456 LERTVHV-------KVWLSYAKFELNAENADNINVELARRVYERANDS 334
L + K WL+Y K + E A+ + RR E ++S
Sbjct: 1643 LALNLSTKKAKFAFKKWLAYEKNIGDDEGAEQVK----RRAIEYVSES 1686
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Frame = -3
Query: 558 QQRLDMPE--LLWKSYIDFEVSQGETEKARQLYERLL------ERTVHVKVWLSYAKFEL 403
+Q L P LLW SY+ + ++ E ++AR++ +R L E + VW++ E+
Sbjct: 1431 RQLLSSPNSSLLWISYMAYHLNLNELQEAREVGKRALSTINYREEDEKLNVWMALLNLEV 1490
Query: 402 NAENADNI 379
D++
Sbjct: 1491 AYGTEDSL 1498
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 41.1 bits (92), Expect = 2e-04
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 3/169 (1%)
Frame = -3
Query: 840 IWLMYAQFEVRCKDLKQARKTLGMALGM-CPRDKLYRGYIDLEIQLREFDRCR-ILYQKF 667
+WL+YA+ D+ AR LG A ++++ + +E E +R R +L +
Sbjct: 580 LWLLYAKERKNVNDIAGARNILGRAFEYNSNSEEIWLAAVRIEFVNNENERARKLLARAR 639
Query: 666 LEYGPENCVTWIKFAELETLLGDTDRARAIYEIAVGQQRLDMPELLWKSYIDFEVSQGET 487
+E G E W K LE +L + DRA + E A+ + K I FE + +
Sbjct: 640 IESGTER--IWTKSISLERILDEKDRALQLLENALKIYPHYDKLYMMKGQI-FE-DKEQI 695
Query: 486 EKARQLYERLLERTVH-VKVWLSYAKFELNAENADNINVELARRVYERA 343
E AR Y + + + +WL AK E + +V AR V++RA
Sbjct: 696 ELARDAYLAGTKVCPYSIPLWLLLAKLE------EKQSVIRARVVFDRA 738
Score = 40.7 bits (91), Expect = 3e-04
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Frame = -3
Query: 696 DRCRILYQKFLEYGPENCVTWIKFAELETLLGDTDRARAIYEIAVGQQRLDMPELLWKSY 517
D R ++ L P++ W++ ELE L G T+ +I E AV + E+LW Y
Sbjct: 527 DCARAVFAFSLRVYPKSEKLWLRAVELEKLYGTTESVCSILEKAV--ESCPKAEILWLLY 584
Query: 516 IDFEVSQGETEKARQLYERLLE-RTVHVKVWLSYAKFE-LNAENADNINVELARRVYERA 343
+ + AR + R E + ++WL+ + E +N EN + LAR E
Sbjct: 585 AKERKNVNDIAGARNILGRAFEYNSNSEEIWLAAVRIEFVNNEN-ERARKLLARARIESG 643
Query: 342 NDSLRSAGEKESRVL 298
+ + + R+L
Sbjct: 644 TERIWTKSISLERIL 658
Score = 39.9 bits (89), Expect = 5e-04
Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 1/172 (0%)
Frame = -3
Query: 843 KIWLMYAQFEVRCKDLKQARKTLGMALGMCPRDKLYRGYIDLEIQLREFDRCRILYQKFL 664
+IWL + E + ++ARK L A ++++ I LE L E DR L + L
Sbjct: 613 EIWLAAVRIEFVNNENERARKLLARARIESGTERIWTKSISLERILDEKDRALQLLENAL 672
Query: 663 EYGPENCVTWIKFAELETLLGDTDRARAIYEIAVGQQRLDMPELLWKSYIDFEVSQGETE 484
+ P ++ ++ + AR Y +P LW E Q
Sbjct: 673 KIYPHYDKLYMMKGQIFEDKEQIELARDAYLAGTKVCPYSIP--LWLLLAKLEEKQ-SVI 729
Query: 483 KARQLYERL-LERTVHVKVWLSYAKFELNAENADNINVELARRVYERANDSL 331
+AR +++R ++ + +WL K EL A N + LA+ + E + L
Sbjct: 730 RARVVFDRAKVKNPKNEFLWLELIKMELRAGNISQVRAALAKALQECPSSGL 781
Score = 29.9 bits (64), Expect = 0.49
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Frame = -3
Query: 840 IWLMYAQFEVRCKDLKQARKTLGMALGMCPRD-KLYRGYIDLEIQLREFDRCRILYQKFL 664
+WL + E + + K+ K AL P L++ ++LE E D RIL + +
Sbjct: 344 LWLEAEKLENQAQHKKRIIKK---ALEFNPTSVSLWKEAVNLE---EEVDNARILLARAV 397
Query: 663 EYGPENCVTWIKFAELETLLGDTDRARAIYEIAVGQQRLDMPELLWKSYIDFEVSQGETE 484
E P + W+ A LET + A+ + A +Q + +W + E QG
Sbjct: 398 ELIPMSIDLWLALARLETY----ENAKKVLNKA--RQTIRTSHEVWIAAARLEEQQGNVS 451
Query: 483 KARQLYER 460
+ ++ R
Sbjct: 452 RVEKIMAR 459
>SPBC4B4.09 |usp105|prp39|U1 snRNP-associated protein
Usp105|Schizosaccharomyces pombe|chr 2|||Manual
Length = 612
Score = 40.3 bits (90), Expect = 3e-04
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Frame = -3
Query: 555 QRLDMPELL-WKSYIDFEVSQGETEKARQLYER-LLERTVHVKVWLSYAKFELNAENADN 382
+ LD +L+ W+ Y+DFE +G+ ++ LYER L+ ++ + W YA++ ++A+ D+
Sbjct: 275 KELDEAQLVNWRKYLDFEEVEGDFQRICHLYERCLITCALYDEFWFRYARW-MSAQ-PDH 332
Query: 381 INVELARRVYERANDSLRSAGEKESRV 301
+N +YERA+ S RV
Sbjct: 333 LND--VSIIYERASCIFASISRPGIRV 357
Score = 37.9 bits (84), Expect = 0.002
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Frame = -3
Query: 738 YRGYIDLEIQLREFDRCRILYQKFLEYGPENCVTWIKFA--ELETLLGDTDRARAIYEIA 565
++ Y D E + + +Y++ + P + W + ++ET GD + R ++
Sbjct: 75 WKKYADFEFFVAGAEASEHIYERGIAGIPHSVDLWTNYCAFKMETN-GDANEVRELFMQG 133
Query: 564 VGQQRLD-MPELLWKSYIDFEVSQGETEKARQLYERLLERTVH 439
LD + W Y++FE Q + QL ERL+ +H
Sbjct: 134 ANMVGLDFLSHPFWDKYLEFEERQERPDNVFQLLERLIHIPLH 176
Score = 37.1 bits (82), Expect = 0.003
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Frame = -3
Query: 687 RILYQKFLEYGPENCVTWIKFAELETLLGDTDRARAIYEIAVGQQRLDMPELLWKSYIDF 508
R +Y +FL P W K+A+ E + + + IYE + + LW +Y F
Sbjct: 58 RSVYDRFLGKYPLLFGYWKKYADFEFFVAGAEASEHIYERGIA--GIPHSVDLWTNYCAF 115
Query: 507 EV-SQGETEKARQLYERLLERT----VHVKVWLSYAKFELNAENADNINVELARRVY 352
++ + G+ + R+L+ + + W Y +FE E DN+ L R ++
Sbjct: 116 KMETNGDANEVRELFMQGANMVGLDFLSHPFWDKYLEFEERQERPDNVFQLLERLIH 172
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 33.5 bits (73), Expect = 0.040
Identities = 27/111 (24%), Positives = 53/111 (47%)
Frame = -3
Query: 486 EKARQLYERLLERTVHVKVWLSYAKFELNAENADNINVELARRVYERANDSLRSAGEKES 307
EK L + L R H+K L+ EL ++NA+N ++ + +N L+ + ++
Sbjct: 1419 EKCENLKKSSLTRFAHLKQELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESASSDA 1478
Query: 306 RVLLLEAWKEFETEIGDEVKLEKVLAKMPRRVKKRQKIISEAGVEEGWEEV 154
+ E +++ ++E + + EK LA ++ Q SEA +G E+
Sbjct: 1479 EQITKEQFEQLKSE---KERTEKELADSKNELEHLQ---SEAVDADGKTEI 1523
>SPCC1672.03c |||guanine deaminase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 527
Score = 32.7 bits (71), Expect = 0.070
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = -3
Query: 549 LDMPELLWKSYIDF--EVSQGETEKARQLYERLLERTV 442
+D+P L W F E S + E+ARQ+Y+R++ERT+
Sbjct: 92 IDVPLLQWLEKYTFPLESSLADLEEARQVYKRVVERTL 129
>SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 736
Score = 31.9 bits (69), Expect = 0.12
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -1
Query: 152 LIIYFQKMKWLDLI---LNCLLQLRTGANNKKYLKVHKMKRMIMMRNQEXPE 6
+ + + +WL ++ NC L+L + KK+LKV + R M+ + E P+
Sbjct: 585 IYVVTENHRWLHIVCEGFNCFLELPEVLHGKKFLKVDEATREDMLMSAETPD 636
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 31.9 bits (69), Expect = 0.12
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 639 TWIKFAELETLLGDTDRARAIYEIAVGQQRLDMPELL 529
TWI+ L L D D+A + YE A+ Q +P +L
Sbjct: 336 TWIQIGRLAELFDDQDKALSAYESALRQNPYSIPAML 372
>SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificity
factor complex subunit Rna14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 733
Score = 31.5 bits (68), Expect = 0.16
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = -3
Query: 666 LEYGPENCVTWIKFAELETLLGDTDRARAIYEIAVGQQRLDMPELLWKSYIDFEVSQGET 487
+ Y P N V +++AE E T R+ YE + ++ +L K+ E S
Sbjct: 359 MRYCPSNFVLHVRYAEHEEANNRTSEIRSTYESLIAALAREISQLDSKASSSSESSTDGN 418
Query: 486 EKARQLYERLLER 448
+ ++L E L++R
Sbjct: 419 PQEKKLPEHLVKR 431
Score = 31.1 bits (67), Expect = 0.21
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = -3
Query: 630 KFAELETLLGDTDRARAIYEIAVGQQRLDMPELLWKSYIDFEVSQGETEKARQLYERL 457
K+ + D ARA++E A+ + D + +++ ++D+E + G+ A L +R+
Sbjct: 514 KYLSYLIAINDETNARALFEKAIPRIAADEAKPIYQKWLDYESNYGDLNAAIALSQRM 571
>SPAC1687.20c |mis6||inner centromere protein
Mis6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 30.3 bits (65), Expect = 0.37
Identities = 12/40 (30%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = -1
Query: 146 IYFQKM-KWLDLILNCLLQLRTGANNKKYLKVHKMKRMIM 30
+Y+ ++ +WL + LN L LR+G+NN++ +H + + ++
Sbjct: 308 VYYSRLDEWLHITLNYGLALRSGSNNQEEEVLHLLYKYLL 347
>SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 198
Score = 29.5 bits (63), Expect = 0.65
Identities = 20/102 (19%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = -3
Query: 312 ESRVLLLEAWKEFETEIG--DEVKLEKVLAKMPRRVKKRQKIISEAGVEEGWEEVFDYIF 139
+++ L+ E W +F+ EIG +E +E+ + +++ + +E + EV+D ++
Sbjct: 85 KNKELIEEEWNDFQNEIGIIEENAVEQEITLQQQQLLAEKDEENEIADNDLEPEVYDILY 144
Query: 138 PEDEMVRPNLKLLAAAKNWR---KQQEIPQSTQNEKDDNDEE 22
E+ + + L+ K R K+ + +ND +
Sbjct: 145 EEESKLGESRDLIRRLKQKRFETKKNNFSVKESSNLSNNDSD 186
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 28.7 bits (61), Expect = 1.1
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = -3
Query: 216 RVKKRQKIISEAGVEEGWEEVFDYIFPEDEM--VRPNLKLLAAAKNWRKQQE-----IPQ 58
+V+++ + +E E ++ FD + D + V PNL+ L A+ W+ ++E +P
Sbjct: 254 QVEEQPALENEESEPEPSDDQFDLVEEVDVLPNVDPNLETLMASSKWKDRKEALDKLLPV 313
Query: 57 STQNEKDDND 28
+Q + DND
Sbjct: 314 LSQPKIKDND 323
>SPAC688.13 |scn1||TatD DNase family Scn1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 335
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 132 DEMVRPNLKLLAAAKNWRKQQEIPQSTQNEK 40
DE+VR +L +++ AK+W + I + + N K
Sbjct: 299 DELVRQSLNVMSEAKSWTFEDTITKISSNSK 329
>SPAC1250.04c |atl1||alkyltransferase-like protein
Atl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 108
Score = 27.9 bits (59), Expect = 2.0
Identities = 8/19 (42%), Positives = 16/19 (84%)
Frame = -3
Query: 579 IYEIAVGQQRLDMPELLWK 523
IY+ ++G+ +L++PE +WK
Sbjct: 89 IYQTSLGEYKLNLPEYMWK 107
>SPBC244.02c |||U3 snoRNP-associated protein Utp6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 488
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -3
Query: 546 DMPELLWKSYIDFEVSQGETEKARQLYERLLERTVHVKVWLSYAKFELNAE 394
++ +LL K+ + + + R E+L R V + +LSY ++E+N E
Sbjct: 15 ELEDLLEKNIFNRDEINNIIKTRRVFEEKLARRQVKLNDFLSYIQYEINLE 65
>SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit
Alp13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 78 KQQEIPQSTQNEKDDNDEEPGTP 10
K +E + NEKDD +EEP P
Sbjct: 146 KNEETTKPENNEKDDFEEEPPLP 168
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = -3
Query: 153 FDYIFPEDEMVRPNLKLLAAAKNWRKQQEIPQSTQNEKDDNDEEP 19
+D I PE+EM R + A K++E + + E++++++ P
Sbjct: 942 WDDIIPEEEMERIEEEERMLAAQRAKEEERERREEEERENDEDHP 986
>SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 972
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 537 ELLWKSYIDFEVSQGETEKARQLYER-LLERTVHVKVWLSYAKF 409
E+L Y+ + E+ Q +E L+E ++ +W+ YA++
Sbjct: 236 EILVSYYLQLGSEEWSKEETNQKFEEVLIEHPGYLNLWMKYAEY 279
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -3
Query: 423 SYAKFELNAENADNINVELARRVYERANDSLRSAGEKESRVLLL 292
S+AKFE + DN++ + +V + + L + +S L++
Sbjct: 45 SFAKFESTVDALDNVSALVEGKVSSKLSSLLEGLSDSKSSTLVV 88
>SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit
Gsa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 509 LRYHKEKLKKQDSFMKDFWN 450
LR H + + K D FM WN
Sbjct: 83 LRLHLQSITKYDEFMNKLWN 102
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 25.8 bits (54), Expect = 8.1
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = +2
Query: 596 VSPSRVSNSANFIHVTQFSGPYSKNFW-YNILHLSNSLNCISRSI*PLYNL--SLGHMPR 766
V+P RV N A+ +G K+FW I L N L +++ +N S +
Sbjct: 935 VAPKRVLNCASDSLRALLAGKTDKSFWGSRIPFLFNKLKSKQKAVSSSFNTENSFLILQA 994
Query: 767 AIPSVFLACFK 799
P F CFK
Sbjct: 995 VSPLTFGGCFK 1005
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,275,444
Number of Sequences: 5004
Number of extensions: 66754
Number of successful extensions: 273
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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