Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_B10
(791 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1554 + 27841801-27842007,27842282-27842455,27842554-278426... 38 0.007
05_05_0098 + 22373384-22373522,22373566-22373772,22373879-223739... 34 0.11
11_01_0737 + 6211149-6211466,6212022-6212183,6212290-6213101,621... 33 0.20
01_06_1310 - 36176008-36176472,36176547-36176774,36177313-361780... 33 0.20
06_01_0876 - 6712224-6712812,6713777-6715233 33 0.34
01_05_0724 - 24612712-24612852,24612985-24613038,24613340-246134... 31 1.0
04_03_0823 - 20073972-20074343,20074432-20074657,20074753-20075126 31 1.4
07_03_0864 - 22115997-22116056,22116293-22116505,22116863-221172... 30 2.4
09_06_0244 + 21822811-21823246,21823337-21823468,21823949-218240... 29 3.2
05_05_0226 + 23442971-23443857,23444209-23446324 29 4.2
11_06_0094 - 20007535-20007658,20007759-20008367,20009021-200090... 28 7.4
02_03_0112 - 15363764-15364060,15364227-15364339,15364376-153644... 28 7.4
02_01_0038 + 265847-266137,266241-266307,266474-266566,267141-26... 28 7.4
01_01_0911 - 7176355-7176372,7176502-7176756,7177352-7177615,717... 28 7.4
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 28 9.8
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 28 9.8
>08_02_1554 +
27841801-27842007,27842282-27842455,27842554-27842653,
27843273-27843725,27843936-27844469,27844500-27844580,
27844690-27844781,27844890-27844963,27845071-27845293,
27845429-27845522,27845607-27845761,27845899-27846129,
27846803-27847003,27847257-27847382,27847497-27847558,
27847775-27847892,27848040-27848324,27848475-27848513
Length = 1082
Score = 38.3 bits (85), Expect = 0.007
Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = -1
Query: 566 GFDDNLHMLELCPTGLKHIFNQIQETITPFLNEDLNDLSLFLSSPIIPMLALTGCLGSGR 387
GF + + +++ + + + ++ L+ L L P + + G GSG+
Sbjct: 492 GFSNGFKLTRSSLGWMENAMSDVTKRLSVLLSSTSLRLFDQLKLPFPGHVLVLGPRGSGK 551
Query: 386 HLVVKTLAKYNG------INCLSIDCNALQSSTAKQTESKINATIQKAKAAAPVIVLLDN 225
+V+ AKY + + IDC+ L AK+T+ I +I +A AP ++L D+
Sbjct: 552 TALVRAAAKYFEDHKEILAHVIYIDCSKLTVGKAKETKQTIEDSISEALLHAPSVILFDD 611
Query: 224 FE 219
+
Sbjct: 612 MD 613
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = -1
Query: 419 LALTGCLGSGRHLVVKTLAKYNGINCLSIDCNALQSSTAKQTESKINATIQKAKAAAPVI 240
+ L G G G+ +V A + +S+ L + +E + KA AAAP +
Sbjct: 829 ILLYGPSGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGSSEQSVRDFFAKAAAAAPCL 888
Query: 239 VLLDNFE 219
+ D FE
Sbjct: 889 LFFDEFE 895
>05_05_0098 +
22373384-22373522,22373566-22373772,22373879-22373953,
22374611-22374744,22375189-22375674,22375854-22376621,
22377367-22377594,22378294-22378773
Length = 838
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = -1
Query: 413 LTGCLGSGRHLVVKTLAKYNGINCLSIDCNALQSSTAKQTESKINATIQKAKAAAPVIVL 234
L G G+G+ L+ K A +G+ LSI + S++ Q+A+ AP I+
Sbjct: 389 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIF 448
Query: 233 LDNFEVL 213
+D + +
Sbjct: 449 IDEIDAI 455
>11_01_0737 +
6211149-6211466,6212022-6212183,6212290-6213101,
6213188-6213395,6214157-6214364,6214752-6215206,
6215585-6216011,6216391-6216471,6216571-6216761,
6216855-6216998
Length = 1001
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = -1
Query: 419 LALTGCLGSGRHLVVKTLAKYNGINCLSIDCNALQSSTAKQTESKINATIQKAKAAAPVI 240
+ L+G G+G+ + + A G+N +I+ + S ++E + AK AAP +
Sbjct: 441 ILLSGPPGTGKTSLATSCAYDEGVNLFTINGPEIISQYYGESEQALYDVFSSAKQAAPAV 500
Query: 239 VLLDNFEVL 213
+ +D + +
Sbjct: 501 IFIDELDAI 509
>01_06_1310 -
36176008-36176472,36176547-36176774,36177313-36178080,
36178250-36178732,36179883-36180010,36180539-36180607,
36180688-36180892,36181005-36181067
Length = 802
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = -1
Query: 413 LTGCLGSGRHLVVKTLAKYNGINCLSIDCNALQSSTAKQTESKINATIQKAKAAAPVIVL 234
L G G+G+ L+ K A +G+ LSI + S++ Q+A+ +P IV
Sbjct: 358 LVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCSPSIVF 417
Query: 233 LDNFEVL 213
+D + +
Sbjct: 418 IDEIDAI 424
>06_01_0876 - 6712224-6712812,6713777-6715233
Length = 681
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = -1
Query: 413 LTGCLGSGRHLVVKTLAKYNGINCLSIDCNALQSSTAKQTESKINATIQKAKAAAPVIVL 234
L G G+G+ L+ K +A G+ S+ + S++ +AKA+AP +V
Sbjct: 254 LVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFDRAKASAPCLVF 313
Query: 233 LDNFEVL 213
+D + +
Sbjct: 314 IDEIDAV 320
>01_05_0724 -
24612712-24612852,24612985-24613038,24613340-24613429,
24613499-24613780,24613926-24614119,24614379-24614508,
24614610-24614690,24614766-24614891,24615019-24615076,
24615319-24615380,24615753-24615803,24615946-24616065,
24616280-24616403,24616832-24616920,24617304-24617396,
24617910-24618063,24618673-24619178
Length = 784
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = -1
Query: 419 LALTGCLGSGRHLVVKTLAKYNGINCLSIDCNALQSSTAKQTESKINATIQKAKAAAPVI 240
+ LTG G+G+ L+ K +A G+ + + ++ + Q AK AP I
Sbjct: 364 ILLTGSPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCI 423
Query: 239 VLLDNFEVLNN 207
V +D + + +
Sbjct: 424 VFIDEIDAVGS 434
>04_03_0823 - 20073972-20074343,20074432-20074657,20074753-20075126
Length = 323
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -1
Query: 518 KHIFNQIQETITPFLNEDLNDLSLFLSSPIIPMLALTGCLGSGRHLVVKTLAK 360
K + + T+ P N N L+ L+S IIP + LTG +G+ L+ K
Sbjct: 148 KIVETAMNTTLDPPFNPYENSLNFLLASYIIPYVGLTGYVGANPRLLTPQARK 200
>07_03_0864 -
22115997-22116056,22116293-22116505,22116863-22117291,
22117407-22117508,22117599-22117691,22117802-22117996
Length = 363
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 319 NALQSIERQLIPLYFANVFTTKCLPDPKQP 408
NAL+ R + PL F F + C P P+ P
Sbjct: 151 NALEWRTRSVTPLAFLGFFLSACFPQPRHP 180
>09_06_0244 + 21822811-21823246,21823337-21823468,21823949-21824037,
21824135-21824224,21825033-21825603,21826097-21826734,
21826978-21827098,21827223-21827337,21828234-21829723,
21829830-21829901,21830151-21830196,21830413-21830515,
21830591-21830674,21831035-21831475,21831651-21831746,
21831896-21832045,21832131-21832274,21832414-21832527,
21832621-21832803,21832901-21832945,21833058-21833192
Length = 1764
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -1
Query: 410 TGCLGSGRHLVVKTLAKYNGINCLSIDCNALQ--SSTAKQTESKINATIQKAKAAAPVIV 237
T C G L+V+ L KY +NC+ + N+ S +A S I I +P IV
Sbjct: 1090 TKCQQQGSRLLVRKLPKYVSLNCIVNETNSEDACSGSASIDSSLIATGITNDNRKSPKIV 1149
Query: 236 LLD 228
L+
Sbjct: 1150 PLN 1152
>05_05_0226 + 23442971-23443857,23444209-23446324
Length = 1000
Score = 29.1 bits (62), Expect = 4.2
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
Frame = -1
Query: 677 SNNKVIKPYFIVRRVTQLTLGENIHATKPQDKYFKPQGFDDNLHMLELCPTGLKHIFNQI 498
SNN + ++ T+ + + + D P+ F +L LE C G K+ +
Sbjct: 735 SNNYIADLSRAIQEFTKAPIDRDTDRSLSLDSEECPENFLSSLD-LETCSEGSKYALRSL 793
Query: 497 Q-----ETITPFLNEDLNDLSLFLSSPIIPMLALTGCLGSGRHLVVKTLA 363
+ + PF+N L +SSP++ + L+ + R L +K +A
Sbjct: 794 KLNGELHKLPPFVNLLSGLTELCISSPMLTQVHLSTLINLNRLLYLKLVA 843
>11_06_0094 -
20007535-20007658,20007759-20008367,20009021-20009094,
20009187-20009837
Length = 485
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 562 NPCGLKYLSCGFVA*IFSPKVSWVTRL 642
N L+ L + A +SP +SWVTRL
Sbjct: 176 NLSNLRVLDLSYTANSYSPDISWVTRL 202
>02_03_0112 -
15363764-15364060,15364227-15364339,15364376-15364478,
15365174-15365218
Length = 185
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +1
Query: 268 CMVALILLSVCLAVELCNALQSIERQLIPLYFANVFTTKCLPD 396
C V I+ S+C+ + L + L+S ER+ + L+ A+ + C+ +
Sbjct: 64 CSVPKIVQSLCIILRLSDDLKSYERERLTLHVASTIDS-CMKE 105
>02_01_0038 +
265847-266137,266241-266307,266474-266566,267141-267193,
267579-267662,267874-267924,268021-268131,268467-268556
Length = 279
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 554 NLHMLELCPTGLKHIFNQIQETITPFLNEDLNDLS 450
NL ELCP GLK I NQ+ +++ L+
Sbjct: 221 NLTYNELCPIGLKSILNQLPRAHASEFQSEISGLA 255
>01_01_0911 -
7176355-7176372,7176502-7176756,7177352-7177615,
7177691-7177810,7177910-7178041,7178136-7178252,
7178335-7178459,7178611-7178920,7179368-7179550,
7179643-7179787,7180126-7181355,7181454-7181563,
7181768-7182037,7182130-7182963
Length = 1370
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +1
Query: 166 ISYNSLHKIILNVLLFSTSKLSSN------TMTGAAAFAFCMVALILLSVCLAVELCNAL 327
I +NS+ +L V +F ++L+S T+T + C+VAL + AV L + L
Sbjct: 610 ILFNSVSAQVLQVAVFLLAELASRDDAVVQTLTRVDSDVDCLVALFKKGLVEAVSLIHLL 669
Query: 328 QSIERQLIPLYFAN 369
QL+ + A+
Sbjct: 670 SPSPEQLVEMDMAD 683
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 773 CKYLDLVESTGKLYFKCTKLTSDLEIDGNPTTSNNKVIKPY 651
C+ L L ++ G F C KL + L P +N I PY
Sbjct: 167 CQRLGLTKAIGVSNFTCKKLNTLLSFATIPPAANQVEINPY 207
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 710 SDLEIDGNPTTSNNKV-IKPYFIVRRVTQLTLGENIHATKPQDKYFKPQGFDDN 552
SD+E D T K+ + F + + T +++G N ATKP + K + N
Sbjct: 411 SDMESDEPAKTPQKKIYVSKSFFILQETAVSVGSNKSATKPGQEEPKTPASNQN 464
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,955,955
Number of Sequences: 37544
Number of extensions: 337153
Number of successful extensions: 784
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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