Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_B10
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              23   3.3  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   7.5  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   7.5  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   9.9  

>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = -1

Query: 398 GSGRHLVVKTLAKY----NGINCLSIDCNALQSSTAKQTESKINATIQKAK 258
           G+   +V++ +A+     NG+N L  +C+A+  +      +K+   I K K
Sbjct: 77  GNFNEVVIREIAEIFLDENGVNKLITECSAISDADLAVKSAKLLKCIGKYK 127


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 240 NDRCCSLCLLYGCINFTFSLLSC 308
           N  C  LCL    IN    LLSC
Sbjct: 40  NGHCSHLCLPAPRINSKSPLLSC 62


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 240 NDRCCSLCLLYGCINFTFSLLSC 308
           N  C  LCL    IN    LLSC
Sbjct: 40  NGHCSHLCLPAPRINSKSPLLSC 62


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 539 LACVNYHQIL 568
           +ACVN HQ+L
Sbjct: 330 IACVNEHQVL 339


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,670
Number of Sequences: 438
Number of extensions: 3843
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)