Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_B02
         (695 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0280 + 1872874-1873000,1873100-1873183,1873258-1874504           32   0.38 
05_06_0248 + 26673107-26674351                                         30   2.0  
03_02_0818 - 11496429-11496767,11496847-11496903,11497040-114971...    28   6.2  
03_05_0034 + 20064750-20065001,20065542-20065730,20066313-200665...    28   8.1  

>02_01_0280 + 1872874-1873000,1873100-1873183,1873258-1874504
          Length = 485

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
 Frame = -2

Query: 436 GSTCHGAGRAL--SRAKSRRNIDYKEVLNKLETMGISIRVASPKLVMEEAP-ESYKNVTD 266
           G+T +G  R L  SR  SRR ++ +E+      +G  +R+A P    + +      N  D
Sbjct: 308 GATGNGKPRLLIISRKNSRRFLNEREMAQAAAAVGFEVRIAEPDQHTDMSTFAQLVNSAD 367

Query: 265 VVDTCHAAGISKKTVKLRPIAVIK 194
           V+   H AG++      R   +I+
Sbjct: 368 VMIGVHGAGLTNMVFLPRGAVLIQ 391


>05_06_0248 + 26673107-26674351
          Length = 414

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
 Frame = -2

Query: 577 STRAFPPNHPLIPVDYQLTG-QPVLIGGTMGTCSYVLTGTHQGM----TETFGSTCHGAG 413
           +T A PP+   +P  Y + G  P     T    +     T +G     + TFG  CHGAG
Sbjct: 178 TTTALPPSKRKLPEKYPVVGTSPTTKTTTTSETAAERRSTKRGAGGSSSITFGGGCHGAG 237

Query: 412 RA 407
            A
Sbjct: 238 AA 239


>03_02_0818 -
           11496429-11496767,11496847-11496903,11497040-11497153,
           11497298-11497408,11497502-11497624,11497918-11498007,
           11498088-11498213,11498317-11498370,11498464-11498544,
           11498626-11498733,11498852-11498923,11499031-11499093,
           11500003-11500194
          Length = 509

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -2

Query: 313 KLVMEEAPESYKNVTDVVDTCHAAGISKKTVKL 215
           +L  EEA + ++ + + VD CH+ G+  + +KL
Sbjct: 114 RLKEEEARKYFQQLINAVDYCHSRGVYHRDLKL 146


>03_05_0034 +
           20064750-20065001,20065542-20065730,20066313-20066511,
           20069479-20069885
          Length = 348

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 18/71 (25%), Positives = 34/71 (47%)
 Frame = -2

Query: 361 LNKLETMGISIRVASPKLVMEEAPESYKNVTDVVDTCHAAGISKKTVKLRPIAVIKG*TH 182
           L ++ET     RV+S K  +   P+S+  +  ++    + G+S K + +   A   G TH
Sbjct: 163 LYEVETGRRDGRVSSAKEAVTYLPDSFDGIRRLITRFASKGLSLKDLAVLSGAHALGNTH 222

Query: 181 FPNVIINYHSF 149
            P++     +F
Sbjct: 223 CPSIAKRLRNF 233


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,976,471
Number of Sequences: 37544
Number of extensions: 296109
Number of successful extensions: 728
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)