Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_B02
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81505-2|CAB04121.2| 505|Caenorhabditis elegans Hypothetical pr... 283 8e-77
Z69360-5|CAE45744.1| 454|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 29 4.2
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 29 4.2
U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated p... 28 5.5
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 28 5.5
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 28 5.5
U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein. 28 5.5
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 28 5.5
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 28 7.3
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 27 9.7
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 27 9.7
AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z81505-2|CAB04121.2| 505|Caenorhabditis elegans Hypothetical
protein F16A11.2 protein.
Length = 505
Score = 283 bits (694), Expect = 8e-77
Identities = 131/168 (77%), Positives = 149/168 (88%)
Frame = -2
Query: 694 MAPDDLDMHVIYDVSHNIAKVEEHVVDGKLKTLLVHRKGSTRAFPPNHPLIPVDYQLTGQ 515
M+ DD+DM VIYDVSHN+AK+EEH+VDG+ + L VHRKG+TRAFP +HPLIPVDYQL GQ
Sbjct: 338 MSADDMDMQVIYDVSHNVAKMEEHMVDGRPRQLCVHRKGATRAFPAHHPLIPVDYQLIGQ 397
Query: 514 PVLIGGTMGTCSYVLTGTHQGMTETFGSTCHGAGRALSRAKSRRNIDYKEVLNKLETMGI 335
PVLIGG+MGTCSYVLTGT QG+ ETFG+TCHGAGRALSRAKSRR I + V++ L+ I
Sbjct: 398 PVLIGGSMGTCSYVLTGTEQGLVETFGTTCHGAGRALSRAKSRRTITWDSVIDDLKKKEI 457
Query: 334 SIRVASPKLVMEEAPESYKNVTDVVDTCHAAGISKKTVKLRPIAVIKG 191
SIR+ASPKL+MEEAPESYKNVTDVVDTC AAGISKK VKLRPIAVIKG
Sbjct: 458 SIRIASPKLIMEEAPESYKNVTDVVDTCDAAGISKKAVKLRPIAVIKG 505
>Z69360-5|CAE45744.1| 454|Caenorhabditis elegans Hypothetical
protein F25H8.5d protein.
Length = 454
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/92 (25%), Positives = 40/92 (43%)
Frame = -2
Query: 466 GTHQGMTETFGSTCHGAGRALSRAKSRRNIDYKEVLNKLETMGISIRVASPKLVMEEAPE 287
G H+GM + HGAG+ AK+ N ++ T G +I V K V + A +
Sbjct: 150 GAHEGMRMVGENVAHGAGKVADGAKAAGNY----AVDSANTAGEAI-VDGAKTVGQTASD 204
Query: 286 SYKNVTDVVDTCHAAGISKKTVKLRPIAVIKG 191
+ + + + H AG+ + K ++G
Sbjct: 205 GMRMIGE--NVAHGAGVVVEGAKSAGEQTVEG 234
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/92 (25%), Positives = 40/92 (43%)
Frame = -2
Query: 466 GTHQGMTETFGSTCHGAGRALSRAKSRRNIDYKEVLNKLETMGISIRVASPKLVMEEAPE 287
G H+GM + HGAG+ AK+ N ++ T G +I V K V + A +
Sbjct: 476 GAHEGMRMVGENVAHGAGKVADGAKAAGNY----AVDSANTAGEAI-VDGAKTVGQTASD 530
Query: 286 SYKNVTDVVDTCHAAGISKKTVKLRPIAVIKG 191
+ + + + H AG+ + K ++G
Sbjct: 531 GMRMIGE--NVAHGAGVVVEGAKSAGEQTVEG 560
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/92 (25%), Positives = 40/92 (43%)
Frame = -2
Query: 466 GTHQGMTETFGSTCHGAGRALSRAKSRRNIDYKEVLNKLETMGISIRVASPKLVMEEAPE 287
G H+GM + HGAG+ AK+ N ++ T G +I V K V + A +
Sbjct: 476 GAHEGMRMVGENVAHGAGKVADGAKAAGNY----AVDSANTAGEAI-VDGAKTVGQTASD 530
Query: 286 SYKNVTDVVDTCHAAGISKKTVKLRPIAVIKG 191
+ + + + H AG+ + K ++G
Sbjct: 531 GMRMIGE--NVAHGAGVVVEGAKSAGEQTVEG 560
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = -2
Query: 511 VLIGGTMGTCSYVLT-GTHQG-MTETFGSTCHGAGRALSRAKSRRNIDYKEVLNKLETMG 338
V+ G + +L+ G H ++E+F S A + L S ++ +LNK+ T
Sbjct: 110 VMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVDLSNDALLNKMATTS 169
Query: 337 ISIRVASPKLVMEEAPESYKNVTDVVDTCHAAGISKKTVKL 215
++ +V S + AP + V ++++ + + ++ K +K+
Sbjct: 170 LNSKVVSQHSWL-LAPMAVNAVKKIINSENDSNVNLKMIKI 209
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = -2
Query: 511 VLIGGTMGTCSYVLT-GTHQG-MTETFGSTCHGAGRALSRAKSRRNIDYKEVLNKLETMG 338
V+ G + +L+ G H ++E+F S A + L S ++ +LNK+ T
Sbjct: 110 VMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVDLSNDALLNKMATTS 169
Query: 337 ISIRVASPKLVMEEAPESYKNVTDVVDTCHAAGISKKTVKL 215
++ +V S + AP + V ++++ + + ++ K +K+
Sbjct: 170 LNSKVVSQHSWL-LAPMAVNAVKKIINSENDSNVNLKMIKI 209
>U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated
protein 2, isoform a protein.
Length = 1538
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 15 FSWCLFQLICCCTLQILHKFLGNPL 89
F + + +ICC TL ++ K+ NPL
Sbjct: 1063 FEYFIMTMICCNTLILMMKYYNNPL 1087
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 15 FSWCLFQLICCCTLQILHKFLGNPL 89
F + + +ICC TL ++ K+ NPL
Sbjct: 1063 FEYFIMTMICCNTLILMMKYYNNPL 1087
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 15 FSWCLFQLICCCTLQILHKFLGNPL 89
F + + +ICC TL ++ K+ NPL
Sbjct: 1182 FEYFIMTMICCNTLILMMKYYNNPL 1206
>U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein.
Length = 1053
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 15 FSWCLFQLICCCTLQILHKFLGNPL 89
F + + +ICC TL ++ K+ NPL
Sbjct: 669 FEYFIMTMICCNTLILMMKYYNNPL 693
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 15 FSWCLFQLICCCTLQILHKFLGNPL 89
F + + +ICC TL ++ K+ NPL
Sbjct: 1182 FEYFIMTMICCNTLILMMKYYNNPL 1206
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -2
Query: 601 TLLVHRKGSTRAFPPNHPLIPVDYQLTGQPVLIGGTMGTC 482
T+L H K + FPP V Y T + V GG GTC
Sbjct: 1190 TILKH-KSMSEVFPPIVKFNMVAYCSTSKRVAFGGKNGTC 1228
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 385 RNIDYKEVLNKLETMGISIRVASPKLVMEE 296
R IDY+EVLN E +G + + + K +E
Sbjct: 744 RQIDYQEVLNSQELLGDELEMFAKKETQKE 773
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 385 RNIDYKEVLNKLETMGISIRVASPKLVMEE 296
R IDY+EVLN E +G + + + K +E
Sbjct: 772 RQIDYQEVLNSQELLGDELEMFAKKETQKE 801
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 385 RNIDYKEVLNKLETMGISIRVASPKLVMEE 296
R IDY+EVLN E +G + + + K +E
Sbjct: 744 RQIDYQEVLNSQELLGDELEMFAKKETQKE 773
>AF016683-1|AAB66199.3| 1360|Caenorhabditis elegans Hypothetical
protein K09F6.3 protein.
Length = 1360
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 213 LNLTVFLLIPAA*HVSTTSVTFLYDSGASS--ITSFGDATLMEIPIVSSL 356
LN T+ LL+P HVS +FL S S T F + P+ S+
Sbjct: 295 LNRTINLLLPIGDHVSAIEASFLSSSSKQSKFFTGFKSSETEVSPVDGSI 344
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,396,412
Number of Sequences: 27780
Number of extensions: 277638
Number of successful extensions: 811
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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