Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_B02
(695 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 23 2.8
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 2.8
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 2.8
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 2.8
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 23 2.8
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 4.8
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 22 4.8
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 4.8
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 6.4
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 6.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 6.4
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 6.4
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 22 6.4
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 23.0 bits (47), Expect = 2.8
Identities = 6/20 (30%), Positives = 14/20 (70%)
Frame = +2
Query: 248 MTCIYDICYILV*LWCLFHY 307
M+C ++ YI++ W +F++
Sbjct: 69 MSCWMNVYYIVILAWAIFYF 88
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -2
Query: 385 RNIDYKEVLNKLETMGISIRVASPKLVMEE 296
RN+ YK + KL MG+ + P+ E
Sbjct: 153 RNVGYKIPITKLTAMGVLNNLHDPEYSARE 182
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -2
Query: 385 RNIDYKEVLNKLETMGISIRVASPKLVMEE 296
RN+ YK + KL MG+ + P+ E
Sbjct: 153 RNVGYKIPITKLTAMGVLNNLHDPEYSARE 182
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -2
Query: 385 RNIDYKEVLNKLETMGISIRVASPKLVMEE 296
RN+ YK + KL MG+ + P+ E
Sbjct: 153 RNVGYKIPITKLTAMGVLNNLHDPEYSARE 182
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 23.0 bits (47), Expect = 2.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 280 KNVTDVVDTCHAAGISKKTVKLRPIAVIK 194
K++T + CH AGI VK + I + K
Sbjct: 162 KSITCALQFCHNAGIVHADVKPKNILMSK 190
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 53 FTNSSQVFRKSITYYYS 103
F N SQ+ R++IT+ Y+
Sbjct: 416 FKNMSQIEREAITFQYT 432
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 281 QECNRCRRYMSC 246
QEC CRR SC
Sbjct: 6 QECPYCRRNFSC 17
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 53 FTNSSQVFRKSITYYYS 103
F N SQ+ R++IT+ Y+
Sbjct: 416 FKNMSQIEREAITFQYT 432
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 536 GLSTNWSACTYWWYNGNLQLCTNWY 462
G N C W N ++Q TN+Y
Sbjct: 47 GFVGNIITCIVIWRNPSMQTPTNYY 71
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.8 bits (44), Expect = 6.4
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +3
Query: 267 SVTFLYDSGASSITSFGDATLMEIPIVSSLFRTSL 371
S++++ D G I GD + PI +L L
Sbjct: 186 SISYVKDDGTEGIAKSGDVLVETEPIYYNLTMVKL 220
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +2
Query: 248 MTCIYDICYILV*LWCLFH 304
++C +I YI++ W LF+
Sbjct: 107 LSCWTNIYYIIILAWALFY 125
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +3
Query: 12 IFSWCLFQLICCCTLQILHKFLGNP 86
I +W LF L+ + + + GNP
Sbjct: 118 ILAWALFYLLVSLRIDLPWRTCGNP 142
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +2
Query: 248 MTCIYDICYILV*LWCLFH 304
++C +I YI++ W LF+
Sbjct: 160 LSCWTNIYYIIILAWALFY 178
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +3
Query: 12 IFSWCLFQLICCCTLQILHKFLGNP 86
I +W LF L+ + + + GNP
Sbjct: 171 ILAWALFYLLVSLRIDLPWRTCGNP 195
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 634 VEEHVVDGKLKTLLVHRKGSTRAFPPNHPLIP 539
V E +++GK T +++ + P H L P
Sbjct: 41 VYEEIINGKKLTEIINETHENVKYLPGHKLPP 72
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,142
Number of Sequences: 438
Number of extensions: 3501
Number of successful extensions: 24
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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