Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_pT_B01
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80215-1|CAB02268.2| 282|Caenorhabditis elegans Hypothetical pr... 295 2e-80
AF125965-2|AAL38961.1| 366|Caenorhabditis elegans Hypothetical ... 87 1e-17
Z78410-9|CAB01637.2| 304|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 29 2.8
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 29 2.8
EF473218-1|ABQ42570.1| 765|Caenorhabditis elegans Y55D9A.1c pro... 29 3.7
EF473217-1|ABQ42569.1| 818|Caenorhabditis elegans Y55D9A.1b pro... 29 3.7
AL032649-5|CAM82814.1| 765|Caenorhabditis elegans Hypothetical ... 29 3.7
AL032649-2|CAC70120.1| 818|Caenorhabditis elegans Hypothetical ... 29 3.7
AL032649-1|CAA21701.1| 816|Caenorhabditis elegans Hypothetical ... 29 3.7
AC024761-4|AAF59466.2| 332|Caenorhabditis elegans Hypothetical ... 29 3.7
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 28 6.6
>Z80215-1|CAB02268.2| 282|Caenorhabditis elegans Hypothetical
protein C36B1.3 protein.
Length = 282
Score = 295 bits (725), Expect = 2e-80
Identities = 138/239 (57%), Positives = 178/239 (74%), Gaps = 8/239 (3%)
Frame = -3
Query: 781 VKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLSDEFLAHRIGLIPLISDDV 602
+KFV+ DT+LSVANS+RRVF+AE PT+AIDWVQ+E N++VL DEF+AHR+GLIP ISD
Sbjct: 19 IKFVLWDTDLSVANSLRRVFMAEVPTIAIDWVQIETNTSVLHDEFIAHRMGLIPFISDYH 78
Query: 601 VDKIRYSRDCMCVDFCSECSVEFTLDVKCTDEQTRHVTTADL---KSSDPRVVPVTS--- 440
V+K++Y+RDC C +FC ECS+ F L +KC DE T VTT L + D V P
Sbjct: 79 VEKMQYTRDCECAEFCDECSIPFILQMKCKDEATLAVTTEHLMPMHNLDTTVRPACGKAL 138
Query: 439 RHRDEDQADYGEADEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTAGVSFEYDPDNIM 260
R R + ++ +EILI+KLRKGQEL L+AY KKGFGKEHAKWNPT GV+FEYDPDN +
Sbjct: 139 RERGSTRDEFHNREEILIVKLRKGQELNLKAYVKKGFGKEHAKWNPTCGVAFEYDPDNAL 198
Query: 259 RHTLYPKPDEWPKSEHTELNED--QYEADFNWEAKPNKFFYNVESSGALKPENIVLMGI 89
RHT+YP +EWP+S+H+ L ED + EA F + KPNKF++++E +GAL + IV MGI
Sbjct: 199 RHTIYPNVEEWPRSDHSSLPEDSTEKEAPFEPDNKPNKFWFSIEGTGALPAQRIVTMGI 257
>AF125965-2|AAL38961.1| 366|Caenorhabditis elegans Hypothetical
protein H43I07.2 protein.
Length = 366
Score = 87.0 bits (206), Expect = 1e-17
Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 21/191 (10%)
Frame = -3
Query: 781 VKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLSDEFLAHRIGLIPLISDDV 602
++F + E +AN++RRV IAE PTMA++ + L N++V+ DE L HR+GL+PL D
Sbjct: 68 LEFDITRIEAPIANALRRVLIAEVPTMALEKIYLYQNTSVIQDEVLCHRLGLLPLRVDPR 127
Query: 601 VDKIRYSRDCMCVDFCSECSVE----------FTLDVKCTDEQTRHVTTADLK------- 473
+ + + +C E F ++V CT + T D K
Sbjct: 128 GFQFPKEKVVGINEKGVDCDEEPEGDPAKNLIFKINVSCTKNRNAVPTATDPKQLYHNSS 187
Query: 472 --SSDPRVVPVTSRHRD--EDQADYGEADEILIIKLRKGQELKLRAYAKKGFGKEHAKWN 305
S VP+ + E+ +D+IL+ KLR GQE++ +A KG G++HAK++
Sbjct: 188 VYSRAFEWVPIADQKTQFTEEAHPRMVSDDILVAKLRPGQEIEASCHAVKGIGRDHAKFS 247
Query: 304 PTAGVSFEYDP 272
P A S+ P
Sbjct: 248 PVATASYRLLP 258
>Z78410-9|CAB01637.2| 304|Caenorhabditis elegans Hypothetical
protein C51E3.5 protein.
Length = 304
Score = 35.9 bits (79), Expect = 0.033
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 73 CFSVQLFPLIQYSLV*ELLMILHYKRICLVSLPS*SPPHTDLH*VQCARFWAIHLVLDIT 252
C+ + + P+I +L LLM + R+ VS P + +L Q + +IHL+ I
Sbjct: 80 CYMLNVLPVIGLTLAAPLLMQIGLDRLLAVSFPI---RYRELQ-FQKLFYTSIHLIFPIL 135
Query: 253 Y-VSLYYQGHIQRTHQQL 303
Y +S+ Y G ++R ++Q+
Sbjct: 136 YTISILYLGFLERNNEQV 153
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
F15B9.7 protein.
Length = 2577
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/23 (56%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = -3
Query: 184 ADFNWEAKPNKFFYNVE-SSGAL 119
A+F++EAK NKFF+ ++ SSG L
Sbjct: 958 AEFDYEAKANKFFFELQASSGQL 980
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/23 (56%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = -3
Query: 184 ADFNWEAKPNKFFYNVE-SSGAL 119
A+F++EAK NKFF+ ++ SSG L
Sbjct: 958 AEFDYEAKANKFFFELQASSGQL 980
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/23 (56%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = -3
Query: 184 ADFNWEAKPNKFFYNVE-SSGAL 119
A+F++EAK NKFF+ ++ SSG L
Sbjct: 958 AEFDYEAKANKFFFELQASSGQL 980
>EF473218-1|ABQ42570.1| 765|Caenorhabditis elegans Y55D9A.1c
protein.
Length = 765
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 298 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 182
+GVS YD D + H Y D PK L + +E+
Sbjct: 234 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 272
>EF473217-1|ABQ42569.1| 818|Caenorhabditis elegans Y55D9A.1b
protein.
Length = 818
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 298 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 182
+GVS YD D + H Y D PK L + +E+
Sbjct: 287 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 325
>AL032649-5|CAM82814.1| 765|Caenorhabditis elegans Hypothetical
protein Y55D9A.1c protein.
Length = 765
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 298 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 182
+GVS YD D + H Y D PK L + +E+
Sbjct: 234 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 272
>AL032649-2|CAC70120.1| 818|Caenorhabditis elegans Hypothetical
protein Y55D9A.1b protein.
Length = 818
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 298 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 182
+GVS YD D + H Y D PK L + +E+
Sbjct: 287 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 325
>AL032649-1|CAA21701.1| 816|Caenorhabditis elegans Hypothetical
protein Y55D9A.1a protein.
Length = 816
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 298 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 182
+GVS YD D + H Y D PK L + +E+
Sbjct: 285 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 323
>AC024761-4|AAF59466.2| 332|Caenorhabditis elegans Hypothetical
protein Y38C1AA.6 protein.
Length = 332
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 601 VDKIRYSRDCMCVDFCSECSVEFTLDVKCTDEQTR 497
+D +Y+ D +C CSEC C D TR
Sbjct: 79 IDNFKYNPDALCAGTCSECKTHTDKLRICVDCLTR 113
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = -3
Query: 412 YGEADEILIIKLRKGQELKLRAYAKKGFGKE--HAKWNPTAGVSFEYDPDNIMRHTLYPK 239
YGE IL R+ ++ + ++ E + W+P + +PD+I++ L+
Sbjct: 3 YGELVHILDYYFRQLRDYSRQVQLERQADTEGRRSSWSPKHWFGVKGNPDDILKLPLH-F 61
Query: 238 PDEWP-KSEHTELNEDQYEADFNW 170
D+ P S H LN + ++ N+
Sbjct: 62 DDQLPTSSHHPPLNSSSHHSNHNY 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,703,775
Number of Sequences: 27780
Number of extensions: 388400
Number of successful extensions: 1074
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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