Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_pT_A21
         (368 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee homeobox-...    23   1.1  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   4.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   6.1  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    20   8.1  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    20   8.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   8.1  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    20   8.1  

>M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H40. ).
          Length = 74

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 198 LWLNSAREQIKSENPGLRV 142
           +W  + R + K +NPGL V
Sbjct: 54  IWFQNRRTKWKKQNPGLDV 72


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 123 GGEIWKSMKDK 91
           GGE+W  ++DK
Sbjct: 450 GGELWTVLRDK 460


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 238 FDFFPDGKNFEIIFELVHNQTVDVENVKK 324
           F+    GKN   + E++H  T  V  +KK
Sbjct: 235 FNLTKYGKNQIKLLEIIHGLTKKVIQLKK 263


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -2

Query: 274 LFQNFCHQEKSQNDGQAEASYVRIHAVVKQREGTDKI 164
           L  +F H+     DG   A+ + +H    Q+ G   I
Sbjct: 275 LIASFSHRSIDVKDGIVLATGITVHRNSAQQAGVGTI 311


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -2

Query: 274 LFQNFCHQEKSQNDGQAEASYVRIHAVVKQREGTDKI 164
           L  +F H+     DG   A+ + +H    Q+ G   I
Sbjct: 275 LIASFSHRSIDVKDGIVLATGITVHRNSAQQAGVGTI 311


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 171 IKSENPGLRVTEIAKK 124
           I ++ PGLR TE+ ++
Sbjct: 346 IAADRPGLRNTELVER 361


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 159 NPGLRVTEIAKKGGEIWKSMKDKTEW 82
           NPG  +    +   EIWK  + K ++
Sbjct: 184 NPGNPLAHYDQTAIEIWKQCEGKIDY 209


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,301
Number of Sequences: 438
Number of extensions: 2045
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)