Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_P19
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.032
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    26   0.30 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     25   0.52 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.52 
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    24   0.91 

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 0.032
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +2

Query: 419 IVLLCIVQIQYFFVCLWFTIAVVCCTVYGAINQILLFPLC-NNFLVHLYLCRHIIILY 589
           + LLCI    +F   + FT+ ++ C  +   N  LLF LC + F +HL     I   Y
Sbjct: 161 LFLLCIYH--FFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYFY 216



 Score = 21.0 bits (42), Expect = 8.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 468 GLLSLLSAVRCMERLTKYYYFLCVTI 545
           G+L  L   +C   L + YYF CV+I
Sbjct: 41  GILDSL-VFKCYN-LRRIYYFYCVSI 64


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 206 CSNTFSNKTNNQYNKHIRAAL 144
           C+N  S +  NQYN  + AAL
Sbjct: 12  CTNVLSEEYTNQYNDELDAAL 32


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 588 YKIIICLHKYKCTKKLLHKGNNNIWLIAPYTV 493
           + IIIC  +   + K+++ GNNN+  +  Y +
Sbjct: 7   FMIIICFER-NLSYKVMYNGNNNVTDLVEYVL 37


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +2

Query: 341 YIFHY*ELDKLFTMFRAMKEK-NV-F*YIVLLCIVQIQYFFVCLWFTIAVVCCTVYGAIN 514
           ++  +  LD L  +   M EK NV F ++ +L I+++   FVCL   I +  C V  A  
Sbjct: 224 FLIFFATLDFLDNVDTIMYEKTNVTFVHLAVLNILRVGKNFVCLLSLIILCDCVVKEAQK 283

Query: 515 QILL 526
            ++L
Sbjct: 284 SLVL 287


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 494 TVYGAINQILLFPLCNNFLVHLYLCR 571
           T Y AI  ++ F LC   LVH    R
Sbjct: 72  TAYSAIFTVIDFSLCKAILVHAITIR 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,303
Number of Sequences: 336
Number of extensions: 3149
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)