Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_P15
(518 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50479-1|AAA93478.1| 151|Anopheles gambiae protein ( Anopheles ... 279 5e-77
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 25 1.5
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 25 1.5
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 25 1.5
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 25 1.5
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 25 1.5
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 25 1.5
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 24 3.5
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 4.7
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 23 4.7
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 23 6.2
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 23 6.2
AJ439060-9|CAD27760.1| 348|Anopheles gambiae putative translati... 23 8.1
>U50479-1|AAA93478.1| 151|Anopheles gambiae protein ( Anopheles
gambiae putativeribosomal protein S13 mRNA, complete
cds. ).
Length = 151
Score = 279 bits (683), Expect = 5e-77
Identities = 129/151 (85%), Positives = 144/151 (95%)
Frame = +3
Query: 21 MGRMHAPGKGXSQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 200
MGRMHAPGKG S+SALPYRRSVP+WLKL+A+DVKEQI KLGKKG+TPSQIG++LRDSHGV
Sbjct: 1 MGRMHAPGKGISKSALPYRRSVPSWLKLSAEDVKEQIKKLGKKGMTPSQIGIILRDSHGV 60
Query: 201 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 380
AQVRFV G K+LRIMKA+GL PD+PEDLY+LIKKAV++RKHLERNRKD DSKFRLIL+ES
Sbjct: 61 AQVRFVNGNKVLRIMKAVGLKPDIPEDLYFLIKKAVSIRKHLERNRKDIDSKFRLILIES 120
Query: 381 RIHRLARYYKTKSVLPPNWKYESSTASALVA 473
RIHRLARYYK K+VLPPNWKYESSTASALVA
Sbjct: 121 RIHRLARYYKIKAVLPPNWKYESSTASALVA 151
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.0 bits (52), Expect = 1.5
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = +2
Query: 125 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 238
T W + + + T + TWS P+ W PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.0 bits (52), Expect = 1.5
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = +2
Query: 125 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 238
T W + + + T + TWS P+ W PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.0 bits (52), Expect = 1.5
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = +2
Query: 125 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 238
T W + + + T + TWS P+ W PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.0 bits (52), Expect = 1.5
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = +2
Query: 125 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 238
T W + + + T + TWS P+ W PP
Sbjct: 141 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.0 bits (52), Expect = 1.5
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = +2
Query: 125 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 238
T W + + + T + TWS P+ W PP
Sbjct: 141 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 25.0 bits (52), Expect = 1.5
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = +2
Query: 125 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 238
T W + + + T + TWS P+ W PP
Sbjct: 142 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 179
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 23.8 bits (49), Expect = 3.5
Identities = 9/55 (16%), Positives = 29/55 (52%)
Frame = +3
Query: 30 MHAPGKGXSQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSH 194
++ GK ++ + + + + A +++ +YK G+ G+T + + ++ +S+
Sbjct: 33 LNGTGKSNILDSICFVLGISNLVHVRATSLQDLVYKSGQAGITKATVTLIFDNSN 87
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.4 bits (48), Expect = 4.7
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +3
Query: 195 GVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 302
G++ V+F+T ++ I +MG+ L D Y+ ++
Sbjct: 443 GMSTVKFITYQEASEISGSMGVGWSLQVDCVYIDRR 478
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 23.4 bits (48), Expect = 4.7
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +3
Query: 195 GVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 302
G++ V+F+T ++ I +MG+ L D Y+ ++
Sbjct: 444 GMSTVKFITYQEASEISGSMGVGWSLQVDCVYIDRR 479
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 23.0 bits (47), Expect = 6.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 290 PDQESCCNEETLG 328
P QES CNEE +G
Sbjct: 946 PMQESPCNEEKIG 958
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 23.0 bits (47), Expect = 6.2
Identities = 12/49 (24%), Positives = 21/49 (42%)
Frame = +2
Query: 74 PPQCPYLVEIDCRRCKGTNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRN 220
PP P ++ID C +L+ ++ ++T + WS S N
Sbjct: 590 PPDVPNRIDIDVTGCSAVSLRLYEPLEGAITTKFKVQ---WSSRSDFSN 635
>AJ439060-9|CAD27760.1| 348|Anopheles gambiae putative translation
initiation factor protein.
Length = 348
Score = 22.6 bits (46), Expect = 8.1
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 96 LKLTADDVKEQIYKL 140
LKL ADDVK Q+ L
Sbjct: 95 LKLAADDVKGQVESL 109
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,363
Number of Sequences: 2352
Number of extensions: 8673
Number of successful extensions: 35
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -