Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_P11
(869 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 27 0.74
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 27 0.74
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 25 2.3
AJ441131-2|CAD29631.1| 208|Anopheles gambiae hypothetical prote... 25 3.0
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 25 3.0
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 25 4.0
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 24 6.9
AJ439398-1|CAD28124.1| 208|Anopheles gambiae hypothetical prote... 23 9.2
AJ439061-1|CAD27770.1| 89|Anopheles gambiae hypothetical prote... 23 9.2
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 23 9.2
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 27.1 bits (57), Expect = 0.74
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +1
Query: 376 YAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRV 549
+ P+ Y+ A L+DP I ++ K P + + +DP GEF + V
Sbjct: 2685 WEPETGLYNYRARLYDPDIGRFYQMDPKEQYPSPYVYAGNSPVSLIDPDGEFAFTLAV 2742
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 27.1 bits (57), Expect = 0.74
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +3
Query: 582 QPLPHRVPVQGDGGQGLRHPVQPRGRAQGHFLPPHRHVEGDPAAAHRRPL 731
QP P P Q +HP GR+ PP H + AAH L
Sbjct: 829 QPPPGSHPGAQTQPQLSQHPPGASGRSSAVITPPSTHHQAAAVAAHHHHL 878
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 25.4 bits (53), Expect = 2.3
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +1
Query: 601 SQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRF 756
+++ ++D++S +L SLE + T E Q + + F + D F
Sbjct: 684 TRFSNLQDQLSNSLMSLECDALATKLKPNNYEYERNQNIYNSQFKVEYSDNF 735
>AJ441131-2|CAD29631.1| 208|Anopheles gambiae hypothetical protein
protein.
Length = 208
Score = 25.0 bits (52), Expect = 3.0
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 150 YIMRRKAATMVDAATLEKL-EAGFSKLQGSDSKSLLKKYLTRXSIRQP 290
+++ R V A E L E+GF + QGS +KS + K + QP
Sbjct: 10 HLLHRMDVLPVPAEHREHLHESGFVRRQGSHAKSSVHKLCHARNTTQP 57
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 25.0 bits (52), Expect = 3.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 167 SRNNGRRRNPREIGGW 214
SR N RRR+PR G W
Sbjct: 253 SRRNPRRRSPRSGGRW 268
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 578 GYPSSERPQRTRVETTNSPAGSR 510
G S + PQR+ + T+SP GS+
Sbjct: 300 GSDSEDLPQRSAEDRTHSPVGSQ 322
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.8 bits (49), Expect = 6.9
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +1
Query: 376 YAPDAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGE 528
+ P+ Y+ A L+DP I ++ K P + + +DP GE
Sbjct: 2675 WEPETGLYNYRARLYDPDIGRFYQMDPKEQYPSPYVYAGNSPVSLIDPDGE 2725
>AJ439398-1|CAD28124.1| 208|Anopheles gambiae hypothetical protein
protein.
Length = 208
Score = 23.4 bits (48), Expect = 9.2
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 150 YIMRRKAATMVDAATLEKL-EAGFSKLQGSDSKSLLKKYLTRXSIRQP 290
+++ R V A E L E+GF + QGS +KS + K + +P
Sbjct: 10 HLLHRMDVLPVPAEHREHLHESGFVRRQGSHAKSSVHKLCHAKNTTRP 57
>AJ439061-1|CAD27770.1| 89|Anopheles gambiae hypothetical protein
protein.
Length = 89
Score = 23.4 bits (48), Expect = 9.2
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 150 YIMRRKAATMVDAATLEKL-EAGFSKLQGSDSKSLLKKYLTRXSIRQP 290
+++ R V A E L E+GF + QGS +KS + K + +P
Sbjct: 10 HLLHRMDVLPVPAEHREHLHESGFVRRQGSHAKSSVHKLCHAKNTTRP 57
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 23.4 bits (48), Expect = 9.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 181 STPQPSRNWRLVSASSRDPTLSRC*RSTL 267
S PS NWRL+ + LS RSTL
Sbjct: 932 SLENPSVNWRLLWRNIHRSCLSSLQRSTL 960
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,147
Number of Sequences: 2352
Number of extensions: 15915
Number of successful extensions: 48
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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