Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_P11
         (869 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   394   e-112
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   358   e-101
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   4.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   4.8  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    23   4.8  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  394 bits (971), Expect = e-112
 Identities = 175/197 (88%), Positives = 189/197 (95%)
 Frame = +1

Query: 277 VFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 456
           VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYAPDAE+Y++FA+LFDPIIEDYH GFK
Sbjct: 34  VFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFK 93

Query: 457 KTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSG 636
           KTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLEGYPFNPCLTE+QYKEME+KVS 
Sbjct: 94  KTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFNPCLTEAQYKEMEEKVSS 153

Query: 637 TLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNE 816
           TLS LEGELKGTFYPLTGMSKETQQ+LIDDHFLFKEGDRFLQAANACRFWPTGRGIYHN+
Sbjct: 154 TLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHND 213

Query: 817 NXTFLVWCNEEDHLRII 867
           + TFLVWCNEEDHLRII
Sbjct: 214 DKTFLVWCNEEDHLRII 230



 Score = 52.8 bits (121), Expect = 4e-09
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = +3

Query: 177 MVDAATLEKLEAGFSKLQGSDSKSLLKKYLTRXSIRQPEEQK 302
           MVD A L+KLE GFSKL  SDSKSLLKKYL++    Q + +K
Sbjct: 1   MVDQAVLDKLETGFSKLSSSDSKSLLKKYLSKDVFDQLKTKK 42


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  358 bits (880), Expect = e-101
 Identities = 160/183 (87%), Positives = 174/183 (95%)
 Frame = +1

Query: 277 VFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 456
           VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYAPDAE+Y++FA+LFDPIIEDYH GFK
Sbjct: 18  VFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFK 77

Query: 457 KTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSG 636
           KTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLEGYPFNPCLTE+QYKEME+KVS 
Sbjct: 78  KTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFNPCLTEAQYKEMEEKVSS 137

Query: 637 TLSSLEGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNE 816
           TLS LEGELKGTFYPLTGMSKETQQ+LIDDHFLFKEGDRFLQAANA RFWPTGRGIYHN+
Sbjct: 138 TLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFLQAANAXRFWPTGRGIYHND 197

Query: 817 NXT 825
           + T
Sbjct: 198 DKT 200



 Score = 29.1 bits (62), Expect = 0.056
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +3

Query: 225 LQGSDSKSLLKKYLTRXSIRQPEEQK 302
           L  SDSKSLLKKYL++    Q + +K
Sbjct: 1   LSSSDSKSLLKKYLSKDVFDQLKTKK 26


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -1

Query: 788 GQKRQALAACRKR-SPSLNRKWSSMSCCWV 702
           G K   ++AC     P + +K    +CCWV
Sbjct: 440 GTKDIPISACSLPCEPGMIKKQQGDTCCWV 469


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -1

Query: 788 GQKRQALAACRKR-SPSLNRKWSSMSCCWV 702
           G K   ++AC     P + +K    +CCWV
Sbjct: 530 GTKDIPISACSLPCEPGMIKKQQGDTCCWV 559


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -3

Query: 153 CNKLGPHRRRLQPESLLLAYNSS*KIANTQDLKAATE 43
           C+  G   R L+PE+LLLA  +        D   A E
Sbjct: 25  CHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIE 61


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,276
Number of Sequences: 438
Number of extensions: 4699
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)