Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_P10
         (787 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    29   0.065
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     29   0.065
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   1.8  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   5.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   7.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   7.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.8  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   9.8  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 28.7 bits (61), Expect = 0.065
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = +2

Query: 491 GERPVKDVINLIGMPEKYQPSEYDTPKFMNTRWVRPYLKHGFINSLAVKKFRRLY 655
           G   + DVI +I    KY   E   P+ MNT  + PY++   I   A K  R  Y
Sbjct: 10  GNIHMSDVIEVIETDTKYNGREDQIPREMNTERLLPYVE--IIEQPASKALRFRY 62


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 28.7 bits (61), Expect = 0.065
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = +2

Query: 491 GERPVKDVINLIGMPEKYQPSEYDTPKFMNTRWVRPYLKHGFINSLAVKKFRRLY 655
           G   + DVI +I    KY   E   P+ MNT  + PY++   I   A K  R  Y
Sbjct: 10  GNIHMSDVIEVIETDTKYNGREDQIPREMNTERLLPYVE--IIEQPASKALRFRY 62


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 490 WRTPCERCYKSYRN 531
           WR  C +C+KS  N
Sbjct: 371 WRLTCRKCFKSRTN 384


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 714 WTWLKSLLCAFLTSLW 667
           WTW K+  C+ +TS +
Sbjct: 108 WTWAKNENCSGITSAY 123



 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = -3

Query: 344 KAYYVLSKVHTTICANLYWTLIATRPVSKLFLLLY*FQANSSL 216
           K+ Y  + VH     N+ WT  + + +S   +L +    ++SL
Sbjct: 283 KSQYQANNVHYQGKENILWTQASAKGISDNGVLFFGLVGDTSL 325


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 144 AVLIDFCDRIHNVVVLRKIFFIITSIHAY 58
           A  + FC+ IHN  V ++       +H +
Sbjct: 567 AATLSFCEMIHNAQVNKRSIHNNYPVHTF 595


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 266  LDELRLKSNTDLHKLWYVLLKERNMLYTMEH 358
            LDEL+L  +   H+L  +L      LY   H
Sbjct: 1448 LDELQLSRHATSHELKGLLCGNTYQLYLTSH 1478


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 266  LDELRLKSNTDLHKLWYVLLKERNMLYTMEH 358
            LDEL+L  +   H+L  +L      LY   H
Sbjct: 1444 LDELQLSRHATSHELKGLLCGNTYQLYLTSH 1474


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -2

Query: 114 HNVVVLRKIFFIITSIHAYTIYFLMTSFYFSWL 16
           H+  +  K+ + I  I   T YF +   +  WL
Sbjct: 212 HDYNLENKLIYFIEDIGLNTYYFFLRQAFPFWL 244


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 273 SSSFQALPTLILVSGQFFFAS 211
           S S  A+P  +  S  FFFA+
Sbjct: 134 SDSTMAIPYAVTKSAMFFFAA 154


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,282
Number of Sequences: 438
Number of extensions: 5250
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)