BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_P07
(766 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM690372-1|CAM84316.1| 353|Anopheles gambiae purine nucleoside ... 44 4e-06
AJ439353-7|CAD27929.1| 555|Anopheles gambiae putative glycerol ... 25 2.6
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 24 4.5
AF515523-1|AAM61890.1| 222|Anopheles gambiae glutathione S-tran... 24 5.9
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 23 7.8
>AM690372-1|CAM84316.1| 353|Anopheles gambiae purine nucleoside
phosphorylase protein.
Length = 353
Score = 44.4 bits (100), Expect = 4e-06
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Frame = +2
Query: 404 VGCTHILATTATGSLVEEYRPGDLVILDDFIDRTW--GRKCTFYDNTEG-GPRGVCHLPM 574
+GCTH++AT A G +YR GD++++ D I+ G N E GPR M
Sbjct: 171 IGCTHLIATNAAGGANPKYRVGDIMLIKDHINLMGFAGNNPLQGPNDERFGPR---FFGM 227
Query: 575 RPAYCERARAALYSAAKSRGYSCH-ETGTAVVIQGPXFSSRAESLVHXQWGGHLVNMTTV 751
Y + A+ G G + GP F + AE + G + M+TV
Sbjct: 228 ANTYDPKLNQQAKVIARQIGIENELREGVYTCLGGPNFETVAEVKMLSMLGVDAIGMSTV 287
Query: 752 PEVV 763
E++
Sbjct: 288 HEII 291
>AJ439353-7|CAD27929.1| 555|Anopheles gambiae putative glycerol
kinase protein.
Length = 555
Score = 25.0 bits (52), Expect = 2.6
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +3
Query: 480 YWTISLIGLGVGSARFTTTRRGVRAAC-ATCPCGRRIVRERAPHC 611
YW G+ G FTT VRAA A C R I+ C
Sbjct: 370 YWRKDARGIFCGLTSFTTKHHFVRAALEAVCFQTRDIIEAMKKDC 414
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 24.2 bits (50), Expect = 4.5
Identities = 11/55 (20%), Positives = 20/55 (36%)
Frame = +2
Query: 581 AYCERARAALYSAAKSRGYSCHETGTAVVIQGPXFSSRAESLVHXQWGGHLVNMT 745
AY + A + + + A P + + +L H Q+G H N +
Sbjct: 7 AYSDMTAAVVATGNTGSYHQSAAAAAAAAANAPVYVPSSRALPHSQYGAHSANFS 61
>AF515523-1|AAM61890.1| 222|Anopheles gambiae glutathione
S-transferase u2 protein.
Length = 222
Score = 23.8 bits (49), Expect = 5.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 427 GEDVSAADLLQCPNISSIVH 368
GE+++ ADL P I+S VH
Sbjct: 153 GENLTIADLSLVPTIASAVH 172
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 23.4 bits (48), Expect = 7.8
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -1
Query: 400 LQCPNISSIVHIARLKLMFSAVSCQQNALDPFD 302
+ CP S VH+ ++ + CQ+N F+
Sbjct: 63 IDCPEADSTVHLRIEPHQYAEMRCQRNRRYDFE 95
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 850,433
Number of Sequences: 2352
Number of extensions: 18548
Number of successful extensions: 80
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -