Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_P07
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23168-10|AAC38810.2| 288|Caenorhabditis elegans Hypothetical p... 187 7e-48
AF045645-1|AAC02605.1| 301|Caenorhabditis elegans Hypothetical ... 33 0.17
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 30 1.6
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 30 1.6
U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam ... 30 1.6
U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam ... 30 1.6
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical pr... 28 8.4
>U23168-10|AAC38810.2| 288|Caenorhabditis elegans Hypothetical
protein B0228.7 protein.
Length = 288
Score = 187 bits (456), Expect = 7e-48
Identities = 88/184 (47%), Positives = 116/184 (63%)
Frame = +2
Query: 215 DDPTLFENQIEKEVVTPFGRPSDVLIEGQIKRVQCVLLARHGRKHQLQPSDVNYRANIWA 394
+DP + + + V TP+G+PSD ++EG I V+CVLLARHGRKH + P +VN+RAN+WA
Sbjct: 13 EDPNILLDPVTVAVDTPYGKPSDDVVEGTINGVECVLLARHGRKHDIMPGNVNFRANLWA 72
Query: 395 LKQVGCTHILATTATGSLVEEYRPGDLVILDDFIDRTWGRKCTFYDNTEGGPRGVCHLPM 574
L G I+A+TA GSL E PG L+ D DRT GR+ TF+D + GVCH+
Sbjct: 73 LYSRGVDVIIASTACGSLQENVEPGHLLFPDSVFDRTTGRQSTFFDGSYDQAPGVCHIQA 132
Query: 575 RPAYCERARAALYSAAKSRGYSCHETGTAVVIQGPXFSSRAESLVHXQWGGHLVNMTTVP 754
P Y E+ R L S A+ H TG V I+GP FS++AES+V WG LVNMT +P
Sbjct: 133 HPTYNEKLRQVLISTAERCQLVHHRTGFGVCIEGPRFSTKAESMVFKSWGASLVNMTMMP 192
Query: 755 EVVL 766
E +L
Sbjct: 193 ECIL 196
>AF045645-1|AAC02605.1| 301|Caenorhabditis elegans Hypothetical
protein K02D7.1 protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.17
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 3/157 (1%)
Frame = +2
Query: 305 KRVQCVLLARHGRKHQLQPSDVNYRANIWALKQVGCTHILATTATGSLVEEYRPGDLVIL 484
K+V C+ H +H + + + + Q+G ++ + A G + R GDL+++
Sbjct: 94 KKVVCLQGRFHPYEHNMDLALCTLPVRV--MHQLGIKIMIVSNAAGGINAVLRHGDLMLI 151
Query: 485 DD--FIDRTWGRKCTFYDNTEGGPR-GVCHLPMRPAYCERARAALYSAAKSRGYSCHETG 655
D F+ G N PR G + + AY ++ R + + +E G
Sbjct: 152 KDHIFLPALAGFSPLVGCN---DPRFGARFVSVHDAYDKQLRQLAIDVGRRSDMTLYE-G 207
Query: 656 TAVVIQGPXFSSRAESLVHXQWGGHLVNMTTVPEVVL 766
V+ GP + S AE + G + M+T EV +
Sbjct: 208 VYVMSGGPQYESPAEVSLFKTVGADALGMSTCHEVTV 244
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 569 PMRPAYCERARAALYS--AAKSRGYSCHETGTAVVI 670
P+ E+ + LYS +K GYSCH TG +V+
Sbjct: 340 PLNSVTFEKEQPVLYSFRTSKGVGYSCHFTGNCLVV 375
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 569 PMRPAYCERARAALYS--AAKSRGYSCHETGTAVVI 670
P+ E+ + LYS +K GYSCH TG +V+
Sbjct: 340 PLNSVTFEKEQPVLYSFRTSKGVGYSCHFTGNCLVV 375
>U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam
protein 6, isoform b protein.
Length = 1227
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 606 HCTARPSLGGTRAMKPALRLSYRDPXSQVAPKAWSIXSGVAIL 734
HCTAR SLG R+ L+ S+ DP +S+ +G A L
Sbjct: 250 HCTARNSLGEVRSPPILLKPSFIDPFRPHRLDVYSLATGGAKL 292
>U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam
protein 6, isoform d protein.
Length = 1196
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 606 HCTARPSLGGTRAMKPALRLSYRDPXSQVAPKAWSIXSGVAIL 734
HCTAR SLG R+ L+ S+ DP +S+ +G A L
Sbjct: 219 HCTARNSLGEVRSPPILLKPSFIDPFRPHRLDVYSLATGGAKL 261
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical protein
E01G6.1 protein.
Length = 1391
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +2
Query: 527 YDNTEGGPRGVCHLPMRPAYCERARAALYSAAKSRGYSCHETGTAVVIQGP 679
Y + +G P CH+ + P +YS K Y C TAV + P
Sbjct: 949 YISRDGFPP-TCHMQLSPCPTTAPYVCIYSPEKQDSYCCAPIDTAVHVVNP 998
>Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical
protein F59F3.5 protein.
Length = 1199
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 236 NQIEKEVVTPFGRPSDVLIEGQIKRVQCVL 325
++IEK V PSD++ EG R+ CV+
Sbjct: 575 HEIEKSVNATKTEPSDIIFEGDNVRLTCVV 604
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,460,305
Number of Sequences: 27780
Number of extensions: 402660
Number of successful extensions: 854
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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