Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_P03
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23523-4|AAC46557.1| 83|Caenorhabditis elegans Hypothetical pr... 33 0.13
AF295927-1|AAL83724.1| 377|Caenorhabditis elegans paraoxonase-l... 33 0.13
AF003141-2|AAK21482.2| 377|Caenorhabditis elegans Mechanosensor... 33 0.13
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 33 0.17
Z81489-7|CAB04009.1| 225|Caenorhabditis elegans Hypothetical pr... 31 0.70
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 31 0.92
AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical... 30 1.2
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 29 2.8
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 29 2.8
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 29 2.8
AB162903-1|BAD32699.1| 159|Caenorhabditis elegans Rim protein. 29 2.8
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 29 3.7
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 28 4.9
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 6.5
Z70684-4|CAA94599.1| 234|Caenorhabditis elegans Hypothetical pr... 27 8.6
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 27 8.6
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 27 8.6
AL132904-16|CAC35849.1| 340|Caenorhabditis elegans Hypothetical... 27 8.6
>U23523-4|AAC46557.1| 83|Caenorhabditis elegans Hypothetical
protein F53A9.2 protein.
Length = 83
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = -1
Query: 436 HQARRGSSYHVRHHHRGSRAGSCGHRCGGQPRSKHSRIWGEHRCRGHG 293
H G +H HHH S GH G H +G H HG
Sbjct: 34 HVHTDGGHHHGHHHHHHSFLHELGHALTGHHHHHHGHHFGHHHHHHHG 81
>AF295927-1|AAL83724.1| 377|Caenorhabditis elegans paraoxonase-like
protein MEC-6 protein.
Length = 377
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/93 (19%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +1
Query: 160 RHTMPRLITPLLIMPHPLSMQLHSSTPPLXVHAAPIVHAASLGYAHGHDTYAH-PKYDYA 336
+ T L+ ++++ P+ + + S T + + A P++H ++ Y H + H P
Sbjct: 262 KDTTLELLYEMMLLTSPIGVFVESKTGDIWIAAHPVIHESAWHYTHPENQNIHSPSQILR 321
Query: 337 YSVADPHTGDHKSQHESRDGGAVHGSYSLVEPD 435
+ + ++ + DG + S S+V D
Sbjct: 322 IRIQEEGNSWVTTEPYANDGATISASSSVVFTD 354
>AF003141-2|AAK21482.2| 377|Caenorhabditis elegans Mechanosensory
abnormality protein6 protein.
Length = 377
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/93 (19%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +1
Query: 160 RHTMPRLITPLLIMPHPLSMQLHSSTPPLXVHAAPIVHAASLGYAHGHDTYAH-PKYDYA 336
+ T L+ ++++ P+ + + S T + + A P++H ++ Y H + H P
Sbjct: 262 KDTTLELLYEMMLLTSPIGVFVESKTGDIWIAAHPVIHESAWHYTHPENQNIHSPSQILR 321
Query: 337 YSVADPHTGDHKSQHESRDGGAVHGSYSLVEPD 435
+ + ++ + DG + S S+V D
Sbjct: 322 IRIQEEGNSWVTTEPYANDGATISASSSVVFTD 354
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +1
Query: 253 HAAPIVHAASLGYAHGHDTYAHPKYDYAYSVADPHTGDHKSQHESRDGGAVHGSY 417
H AP H + HGH + AH + + A H G H H + HG +
Sbjct: 433 HHAPAHHGHHESHGHGHHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEH 487
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/64 (26%), Positives = 23/64 (35%)
Frame = -1
Query: 439 NHQARRGSSYHVRHHHRGSRAGSCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWG 260
+H + +H HHH + G GH H G H GHG G G
Sbjct: 554 SHHSPAHHGHHGEHHHAPAHHGHHGHH------GSHGVHHGHHESHGHGHHAPAHHGHHG 607
Query: 259 QRGL 248
+ G+
Sbjct: 608 EHGV 611
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +1
Query: 271 HAASLGYAHG-HDTYAHPKYDYAYSVADPHTGDHKSQHESRDGGAVHGSYS 420
H G HG H + AH + A+ H G H H+ ++ HG +S
Sbjct: 669 HHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHS 719
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/76 (26%), Positives = 31/76 (40%)
Frame = +1
Query: 271 HAASLGYAHGHDTYAHPKYDYAYSVADPHTGDHKSQHESRDGGAVHGSYSLVEPDGSVRK 450
H + HGH AH + + V H G H + + + G HG++ P
Sbjct: 587 HGHHESHGHGHHAPAHHGHHGEHGV---HHGHHGAGYGAHHGH--HGAHHHHAPHHEHH- 640
Query: 451 VDYTADDHHGFNAVVH 498
++ D HHG + V H
Sbjct: 641 -EHHGDHHHGSHGVHH 655
>Z81489-7|CAB04009.1| 225|Caenorhabditis elegans Hypothetical
protein C55A1.9 protein.
Length = 225
Score = 31.1 bits (67), Expect = 0.70
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = +1
Query: 73 PCWLPPTLVSCHTTTLRQ--FRPRASSVMMPRHTMPRLITPLLIMPHPLSMQLHSSTPPL 246
PC LP + + T T + R S V P + +P I P P P M S PPL
Sbjct: 16 PCSLPSPMATKPTKTNEGILWDFRGSIVYEPLNPLPNYIPPRASPPSPPKMNGKYSLPPL 75
Query: 247 XVHAAPIVHAASLG-YAHG 300
+ +P+V + G + HG
Sbjct: 76 TM--SPLVEPSVTGSFDHG 92
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 30.7 bits (66), Expect = 0.92
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Frame = +1
Query: 226 HSSTPPLXVHAAP-----IVHAASLGYAHGH-DTYAH-PKYDYAYSVADPHTGDHKSQHE 384
H P VH AP VH + G HGH DT+ H + + H G ++S +E
Sbjct: 16 HGGYAPPPVHGAPGYMPPTVHVHTDGGHHGHMDTHHHHDSHHHGGHHGGHHGGHYESHYE 75
Query: 385 SRDGGAVHGSY 417
S HG +
Sbjct: 76 SHHHHGHHGHH 86
>AL110485-18|CAB60366.1| 108|Caenorhabditis elegans Hypothetical
protein Y46G5A.23 protein.
Length = 108
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1
Query: 403 RHHHRGSRAGSCGHRCGG 350
R HHRG R G GHR GG
Sbjct: 73 RRHHRGHRHGGGGHRHGG 90
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 373 SCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWGQ 257
SC RCGG+ +SK+ IW C+ + K G+W Q
Sbjct: 95 SCA-RCGGRAQSKNKAIWACSLCQKRQQILAK-TGKWFQ 131
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 373 SCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWGQ 257
SC RCGG+ +SK+ IW C+ + K G+W Q
Sbjct: 95 SCA-RCGGRAQSKNKAIWACSLCQKRQQILAK-TGKWFQ 131
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 373 SCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWGQ 257
SC RCGG+ +SK+ IW C+ + K G+W Q
Sbjct: 95 SCA-RCGGRAQSKNKAIWACSLCQKRQQILAK-TGKWFQ 131
>AB162903-1|BAD32699.1| 159|Caenorhabditis elegans Rim protein.
Length = 159
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 373 SCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWGQ 257
SC RCGG+ +SK+ IW C+ + K G+W Q
Sbjct: 95 SCA-RCGGRAQSKNKAIWACSLCQKRQQILAK-TGKWFQ 131
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/47 (40%), Positives = 20/47 (42%)
Frame = -1
Query: 388 GSRAGSCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRGRWGQRGL 248
G GS G GG H +G H GHGRS G G RGL
Sbjct: 57 GGHGGSHGGSHGGH--GSHGGSYGGHS--GHGRSFSTSSGSSGYRGL 99
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 4 PADDQSLFCLSSAKCSPKCSSLAPCWLP 87
P D SL C AKC P SS C P
Sbjct: 776 PRDCHSLRCFHGAKCVPSPSSFPDCICP 803
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 271 HAASLGYAHGHDTYAH-PKYDYAYSVADPHTGDHKSQHESRDGGAVHGSYS 420
HA G+AH H ++H + D+ + A H G H D G HG+ S
Sbjct: 88 HAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHG-----HSHEDHGHSHGAES 133
>Z68118-5|CAA92185.1| 245|Caenorhabditis elegans Hypothetical
protein R01E6.5 protein.
Length = 245
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = -1
Query: 481 NHDGHQRCSLLYVRNHQARRGSSYHVRHHHRGSRAGSCGHRCGGQ 347
+H H+ S Y +++ G ++H + H G A G+ G+
Sbjct: 6 SHSSHENASGKYGYGDESQHGKNFHQKAEHSGHEAKEKGYSQDGK 50
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = -1
Query: 409 HVRHHHRGSRAGSCGHRCGGQPRSKHSRIWGEHRCRGHGRSQEKPRG 269
H H GSR+GS G R G R G H HG PRG
Sbjct: 334 HGGHGRHGSRSGSPGGRHGHGGRHGPPHCPGRH--GRHGSRSHSPRG 378
>Z70684-4|CAA94599.1| 234|Caenorhabditis elegans Hypothetical
protein F28D1.4 protein.
Length = 234
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/34 (29%), Positives = 13/34 (38%)
Frame = -3
Query: 272 WTMGAAWTXRGGVDEWSCMDNGCGIMSRGVMSRG 171
WT G W G + + C CG+ R G
Sbjct: 63 WTAGRIWARTGCNENFDCDTGSCGVKLRACNGAG 96
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 286 GYAHGHDTYAHPKYDYAYSVADPHTGDHKSQHESRDGGAVH 408
G++HGHD + H + +++ D + DH H + H
Sbjct: 371 GHSHGHDDHGHDSHGHSH---DHNEHDHGHSHGGNNDNHGH 408
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 286 GYAHGHDTYAHPKYDYAYSVADPHTGDHKSQHESRDGGAVH 408
G++HGHD + H + +++ D + DH H + H
Sbjct: 389 GHSHGHDDHGHDSHGHSH---DHNEHDHGHSHGGNNDNHGH 426
>AL132904-16|CAC35849.1| 340|Caenorhabditis elegans Hypothetical
protein Y111B2A.20 protein.
Length = 340
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 103 CHTTTLRQFRPRASSVMMPRHTMPRLITPLLIMPHPLS-MQLHSSTPPLXVHAAPIV 270
C T+ +F P S++ + +I +L M HPLS Q+ ++T A +V
Sbjct: 263 CIFKTIEEFSPLTCSIVTTTRKLFTIIISVLFMNHPLSGRQILATTVVFSALTADVV 319
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,134,407
Number of Sequences: 27780
Number of extensions: 275564
Number of successful extensions: 954
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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