Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_O21
         (558 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0836 + 23550376-23550470,23551617-23551803                       54   8e-08
05_01_0085 - 568015-568204,568286-568365                               45   4e-05
08_02_1396 - 26742694-26742915,26743736-26743771                       36   0.017
12_01_0183 - 1350451-1350477,1350887-1350969,1350977-1352696,135...    34   0.067
11_01_0184 - 1444246-1444434,1446291-1446719                           33   0.15 
08_02_0462 + 17444726-17445135,17445271-17445546,17446523-17448461     29   3.3  
04_03_0983 + 21423086-21423280,21423330-21423404,21423531-214236...    28   4.4  
08_02_0926 - 22680661-22680765,22680935-22681084,22681473-22682294     28   5.8  
03_05_0450 - 24443396-24443501,24443642-24443794,24446213-24446325     27   7.7  

>12_02_0836 + 23550376-23550470,23551617-23551803
          Length = 93

 Score = 54.0 bits (124), Expect = 8e-08
 Identities = 22/49 (44%), Positives = 28/49 (57%)
 Frame = +2

Query: 194 YNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQRFHE 340
           YN L E CF DC+  F  +TL   E+ C   C EK+L+ + RV  RF E
Sbjct: 36  YNSLVERCFTDCVDTFRRKTLDKQEESCVRRCAEKFLKHSMRVGMRFAE 84


>05_01_0085 - 568015-568204,568286-568365
          Length = 89

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 18/47 (38%), Positives = 28/47 (59%)
 Frame = +2

Query: 194 YNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQRF 334
           YN +S  CF+DC+  F  RTL   E+ C  +C+ K+L ++   + RF
Sbjct: 31  YNWVSHRCFSDCVTTFYRRTLGKKEEDCVRSCVRKFLLLSSASAARF 77


>08_02_1396 - 26742694-26742915,26743736-26743771
          Length = 85

 Score = 36.3 bits (80), Expect = 0.017
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +2

Query: 200 KLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQRF 334
           KL+ +C++ CI         S E  C  NC +++L M+  +++RF
Sbjct: 38  KLTSVCWDKCITSTPGSKFSSGETTCLTNCAQRFLDMSVIIAKRF 82


>12_01_0183 -
           1350451-1350477,1350887-1350969,1350977-1352696,
           1354258-1354428,1355892-1355939
          Length = 682

 Score = 34.3 bits (75), Expect = 0.067
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +2

Query: 200 KLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQRFHE 340
           KL+++C++ CI      +  ++E  C  NC +++L +     QR  E
Sbjct: 30  KLTDVCWDKCITGSIGSSFSNSEASCLSNCAKRFLELKMLTMQRPQE 76


>11_01_0184 - 1444246-1444434,1446291-1446719
          Length = 205

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 11/44 (25%), Positives = 24/44 (54%)
 Frame = +2

Query: 200 KLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQR 331
           KL+++C++ CI      +  ++E  C  NC +++  +   + QR
Sbjct: 157 KLTDVCWDKCITGSIGSSFSNSEASCLSNCAKRFFELKMLIVQR 200


>08_02_0462 + 17444726-17445135,17445271-17445546,17446523-17448461
          Length = 874

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -3

Query: 472 IGCAFSYYTLKKMTR*VTNIPYFLTRVTRFLC*C*HVFIGKHLELMESL 326
           IGC  S  TL  M   +  +P  +TR+   +    H+FIG  ++L + +
Sbjct: 569 IGCLQSLETLNVMDNHMVQLPQCITRLGNLM----HLFIGNQIQLPDGI 613


>04_03_0983 +
           21423086-21423280,21423330-21423404,21423531-21423632,
           21423721-21423774,21423880-21423972,21424526-21424618,
           21427329-21427433,21427517-21427615,21427701-21427997,
           21428512-21428622
          Length = 407

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 292 HTVDSAFVLGRF*SPRRKIMNAIIETKFRQL 200
           H V+S   +G      RK  NA+++TKFR L
Sbjct: 373 HNVESKVYIGNISDNNRKWNNALLKTKFRGL 403


>08_02_0926 - 22680661-22680765,22680935-22681084,22681473-22682294
          Length = 358

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 234 MILRRGL*NLPRTNALSTVWRNIYE*IRGFHKDSMSS 344
           +I R G+ ++ RT+ LS  WR  +  +RG   D  SS
Sbjct: 30  IISRLGVRDVVRTSVLSHAWRRRWRSVRGLDLDFRSS 66


>03_05_0450 - 24443396-24443501,24443642-24443794,24446213-24446325
          Length = 123

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
 Frame = +2

Query: 194 YNKLSELCFNDCIHDFTSRT--LKSTED 271
           +N+ SE CF +  +DF S+T  LKS +D
Sbjct: 52  FNEYSEQCFAEVSNDFASKTRLLKSMKD 79


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,589,829
Number of Sequences: 37544
Number of extensions: 200895
Number of successful extensions: 410
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)