Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_O14
         (842 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    34   0.001
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   2.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   4.7  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   6.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   6.2  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   8.1  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   8.1  

>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 34.3 bits (75), Expect = 0.001
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +1

Query: 775 QGGDWGALIGXAMATFFPKEII 840
           QGGDWG++I   MA  FP++II
Sbjct: 1   QGGDWGSVIASDMAVLFPEKII 22


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +1

Query: 76  CQCVLXXASSCHVFCLSSCRC 138
           C C    A  C + C + C+C
Sbjct: 747 CHCCDFDACDCEMTCPAGCKC 767


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 5/52 (9%)
 Frame = -3

Query: 630 PVFTDSCEMRNGFVELPDRARPSVE*QKWY-----YFNAFRDLWSNPHEVNI 490
           P FT +  +R   +E PD+     E   W+     YF      W N    N+
Sbjct: 505 PPFTYASLIRQSIIESPDKQLTLNEIYNWFQNTFCYFRRNAATWKNAVRHNL 556


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 293 HRLTESDLEGFDAGI 249
           +RLT+  L+G+DAG+
Sbjct: 7   YRLTKYLLDGYDAGV 21


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/39 (28%), Positives = 15/39 (38%)
 Frame = +1

Query: 559 HGWPGSVREFYEAIPHLTAVSKDRNFALEIIAPSLPGYG 675
           H WP  +R  Y  + +L       N A   I   +  YG
Sbjct: 211 HMWPSDLRTIYSRVRNLNRTHGFPNDAQPYIFQEVIDYG 249


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 429 AERQKFLNQYPHFKTNIQ 482
           A  ++ LN YP F+ N+Q
Sbjct: 637 ASMKENLNVYPEFQENVQ 654


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +3

Query: 234  LKQKQDTSIKPFEITFSETMVKELKERIKKRRPFAPPLEGV 356
            L +  ++S  P +      +   +K++  KRR   P LEGV
Sbjct: 963  LYKSSESSCNPDQKPTEYLLEDSMKQQYGKRRKEPPWLEGV 1003


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,800
Number of Sequences: 438
Number of extensions: 4819
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)