BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_O10
(855 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY345586-1|AAR09143.1| 427|Anopheles gambiae myosuppressin rece... 24 5.1
AJ010904-1|CAA09390.1| 142|Anopheles gambiae nitric oxide synth... 24 6.8
>AY345586-1|AAR09143.1| 427|Anopheles gambiae myosuppressin
receptor protein.
Length = 427
Score = 24.2 bits (50), Expect = 5.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 428 MCTLFCMFYCVSGTINGVHTFRHQARS 508
+C L C+F ++ T+N V R + RS
Sbjct: 58 VCLLVCIFGSIANTLNIVVLTRREMRS 84
>AJ010904-1|CAA09390.1| 142|Anopheles gambiae nitric oxide synthase
protein.
Length = 142
Score = 23.8 bits (49), Expect = 6.8
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +3
Query: 426 ECVHYFVCSIAFLAQSTESIRLDIRHDHANRVEIRINKMASKVRRE 563
E H +VC +A+ I H NR E + K +R E
Sbjct: 88 EKAHIYVCGDVTMAEHVYQTLRKILATHENRTESEMEKYMLTLRDE 133
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,891
Number of Sequences: 2352
Number of extensions: 10997
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -