Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_O10
         (855 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039715-5|AAB96730.1|  391|Caenorhabditis elegans Hypothetical ...    30   2.4  
Z71178-13|CAF31498.1|  342|Caenorhabditis elegans Hypothetical p...    29   3.2  
AF067208-1|AAC16975.1|  298|Caenorhabditis elegans Hypothetical ...    29   4.2  
Z81453-6|CAH04639.1|  283|Caenorhabditis elegans Hypothetical pr...    28   9.7  
AF016422-8|AAW88392.1|  289|Caenorhabditis elegans Serpentine re...    28   9.7  

>AF039715-5|AAB96730.1|  391|Caenorhabditis elegans Hypothetical
           protein R06A10.4 protein.
          Length = 391

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +3

Query: 468 QSTESIRLDIRHDHANRVEIR-INKMASKVRRETTTVK 578
           +ST SIR   R DH +RV+ R ++++A+ ++R   T K
Sbjct: 349 KSTRSIRSVTRSDHGHRVDPREVDELANDLKRVAQTTK 386


>Z71178-13|CAF31498.1|  342|Caenorhabditis elegans Hypothetical
           protein B0024.13b protein.
          Length = 342

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = -3

Query: 655 VNIINEKDYIILKRL-FNNVNG*LFFYFTVVVSRRTLLAILLMRISTRLA*SCLMSKRMD 479
           +N + ++ Y IL+ L FNNV+  L  +FT   S   LL I L  ++ RL  +  +S   D
Sbjct: 123 LNFVKQQKYCILQMLYFNNVSNILCNHFTPSTSILALLLISL-HVARRLYETIFVSVYSD 181

Query: 478 S 476
           S
Sbjct: 182 S 182


>AF067208-1|AAC16975.1|  298|Caenorhabditis elegans Hypothetical
           protein C46F2.1 protein.
          Length = 298

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = -3

Query: 649 IINEKDYIILKRLFNNVNG*LFFYFTV 569
           ++  KD+++ ++ FN +NG + F  T+
Sbjct: 184 VVRGKDFVVYRKKFNEINGLIMFTITI 210


>Z81453-6|CAH04639.1|  283|Caenorhabditis elegans Hypothetical
           protein B0250.10 protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = -2

Query: 587 FFLFYSSRFPTYFASHFINANFDTIGVIVPDV*TYG 480
           F + + +  P Y +SH  + N + +G+ +  + T+G
Sbjct: 221 FIMLFFNIIPLYISSHITSVNLEILGLFIVLIKTFG 256


>AF016422-8|AAW88392.1|  289|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 60 protein.
          Length = 289

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 587 FFLFYSSRFPTYFASHFINANFDTIG 510
           F LF     P++  SHF   NF+T+G
Sbjct: 219 FILFTFDLLPSFLFSHFPAINFETVG 244


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,091,810
Number of Sequences: 27780
Number of extensions: 269594
Number of successful extensions: 652
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)