Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_O09
         (785 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0227 - 1718726-1721183,1721804-1721957,1722090-1722165,172...    31   0.79 
01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480     30   1.8  
02_01_0282 + 1882844-1883413,1883519-1883644,1883733-1883930,188...    30   2.4  
11_01_0229 - 1771701-1774164,1774694-1774847,1774980-1775055,177...    28   7.3  
11_03_0116 - 10220821-10220937,10221414-10221497,10221613-102216...    28   9.7  

>12_01_0227 - 1718726-1721183,1721804-1721957,1722090-1722165,
            1722327-1722485,1722552-1722662,1722791-1722841,
            1722948-1723192,1723745-1725278
          Length = 1595

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +3

Query: 99   CLGFSIAAHTKRXVVSSSQKMXIXVQTYFGSCSCCLEXG-YLKXLWSEHKWQGHTEVYGE 275
            CLG  +AA+    ++  + +M   V+  +GS          LK L  + +W    ++Y E
Sbjct: 909  CLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDE 968

Query: 276  MLTK 287
            ML K
Sbjct: 969  MLGK 972


>01_06_0360 - 28729006-28729446,28729810-28730258,28730499-28731480
          Length = 623

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 189 SCSCCLEXGY-LKXLWSEHKWQGHTEVYGEMLTKCYAFSWIQLDSEDYN 332
           SC C ++  + +  LW    WQ  T    +  TK   +SW+ L+S+  N
Sbjct: 456 SCKCKIKGSHTIVGLWKHEYWQP-TMKTSDWYTKSCTYSWVSLNSKLIN 503


>02_01_0282 + 1882844-1883413,1883519-1883644,1883733-1883930,
            1884442-1884666,1884844-1885224,1885282-1885989,
            1886546-1886839,1887211-1887709,1887949-1888721
          Length = 1257

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = +3

Query: 120  AHTKRXVVSSSQKMXIXVQTYFGSCSCCLEXGYLKXLWSEHKWQGHTEVYGEMLTK 287
            +H+K+ + S  +K    +  YF +    L+ G++K     + W G  E++G +L K
Sbjct: 1095 SHSKQELASVVEKFQYILTDYFNNKKSRLKLGFVKEAVRRNPWVGE-ELFGFVLQK 1149


>11_01_0229 -
           1771701-1774164,1774694-1774847,1774980-1775055,
           1775439-1775477,1778516-1778674,1778741-1778851,
           1779014-1779064,1779173-1779256
          Length = 1045

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +3

Query: 99  CLGFSIAAHTKRXVVSSSQKMXIXVQTYFGSCSCCLEXG-YLKXLWSEHKWQGHTEVYGE 275
           CLG  +AA+    ++  +  M   ++  +GS          LK L  + +W    ++Y E
Sbjct: 358 CLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDE 417

Query: 276 ML 281
           ML
Sbjct: 418 ML 419


>11_03_0116 -
           10220821-10220937,10221414-10221497,10221613-10221687,
           10223267-10223318,10223367-10223413,10226277-10226333,
           10226829-10226927,10229462-10229581,10229666-10229788,
           10229988-10230104
          Length = 296

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +3

Query: 345 PCIKRLRESCSFRNLVIRSQKQLMDEISNGHEPAIKIEYVN 467
           P ++ +  S SFRN+++    QL+ E++ G  P    +YV+
Sbjct: 169 PWVEFINPSESFRNIIVDYPFQLITELTRGVPPINMQKYVD 209


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,225,532
Number of Sequences: 37544
Number of extensions: 304915
Number of successful extensions: 657
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)