Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_O09
         (785 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35663-11|CAA84732.2|  791|Caenorhabditis elegans Hypothetical p...    29   5.0  
AC006792-1|AAF60741.2|  642|Caenorhabditis elegans Hypothetical ...    29   5.0  
Z68337-2|CAA92746.2|  516|Caenorhabditis elegans Hypothetical pr...    28   8.7  

>Z35663-11|CAA84732.2|  791|Caenorhabditis elegans Hypothetical
           protein T04A8.13 protein.
          Length = 791

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +2

Query: 557 QTKRESRQKNNDHRSNKEKTSKQASEEH*K*VNEICHRRPXEDD 688
           + K+E +++  D +  KEKT     +E  K   E     P +DD
Sbjct: 139 EKKKEKKEEKKDEKEKKEKTEDDKEKEKEKTKEEKVKEDPKKDD 182


>AC006792-1|AAF60741.2|  642|Caenorhabditis elegans Hypothetical
           protein Y50C1A.1 protein.
          Length = 642

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 342 DPCIKRLRESCSFRNLVIRSQKQLMDEISNGHEPAIKIEY-VNEAEKDSSEPELTR 506
           D CI R+  +C   + ++ +  Q MD+I N +  + K  +  N+  +  S   ++R
Sbjct: 471 DDCIARMNSTCVLASELLPTHHQYMDKIINEYMKSAKQRFQQNQRTQSDSRKRISR 526


>Z68337-2|CAA92746.2|  516|Caenorhabditis elegans Hypothetical
           protein M7.2 protein.
          Length = 516

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 390 VIRSQKQLMDEISNGHEPAIKIEYVNEAEKDSSEPELTRDSV 515
           V+++ +Q +  + + HE A +I   N    DSSEP L  + +
Sbjct: 12  VLKTVQQTLFALRDEHEAATRILEANLINSDSSEPSLPSEKM 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,367,711
Number of Sequences: 27780
Number of extensions: 290381
Number of successful extensions: 825
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)