Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_O08
         (711 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0060 - 445619-445739,446026-446182,446274-446365,446516-44...    37   0.018
10_07_0056 + 12451510-12451554,12453099-12453149,12453754-124538...    36   0.032
07_03_1281 - 25439634-25439750,25439868-25440071,25440328-254404...    29   3.6  
11_01_0450 - 3487464-3487844,3487883-3488268,3488883-3489033,348...    29   4.8  
12_02_0346 - 17776871-17781445                                         28   6.4  

>07_01_0060 -
           445619-445739,446026-446182,446274-446365,446516-446580,
           447052-447117,447707-447838,448125-448298,449025-449183,
           449297-449384,449492-449573,449757-449874,449959-450162
          Length = 485

 Score = 36.7 bits (81), Expect = 0.018
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = +1

Query: 616 KGLTVENMNPNIVQLEYAVRGPLVIRAGEIEK 711
           K L  E +N N+ +++YAVRG L +RA E++K
Sbjct: 11  KPLDYEELNENVKKVQYAVRGELYLRASELQK 42


>10_07_0056 +
           12451510-12451554,12453099-12453149,12453754-12453804,
           12453879-12453944,12454011-12454072,12454459-12454537,
           12454618-12454722,12454824-12454934,12455017-12455154,
           12455298-12455399,12455400-12455474,12455574-12455694,
           12455768-12455922,12456004-12456078,12456160-12456363,
           12457105-12457221
          Length = 518

 Score = 35.9 bits (79), Expect = 0.032
 Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = +1

Query: 607 MASKGLTVENMNPNIV-QLEYAVRGPLVIRAGEIEK 711
           MA+  + V+N+NP +V   EYAVRG +VI A  +++
Sbjct: 1   MAAPSVAVDNLNPKVVLNCEYAVRGEIVIHAQRLQQ 36


>07_03_1281 -
           25439634-25439750,25439868-25440071,25440328-25440402,
           25440477-25440631,25440704-25440824,25440946-25441020,
           25441216-25441353,25441617-25441727,25441883-25441987,
           25442061-25442139,25442488-25442549,25442634-25442699,
           25442812-25442907,25443353-25443403,25443629-25443709
          Length = 511

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = +1

Query: 622 LTVENMNPNIVQLEYAVRGPLVIRA 696
           ++++ +NP +++ EYAVRG +V  A
Sbjct: 19  VSLDTINPKVLKCEYAVRGEIVTHA 43


>11_01_0450 -
           3487464-3487844,3487883-3488268,3488883-3489033,
           3489132-3491102,3492090-3492149,3492240-3492436,
           3492678-3492963
          Length = 1143

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = +1

Query: 460 SPTYYK*FD*LRNMSQLKLISRVSRVLSGAVKRSELFE-INKVNTNNARTMASKGLTVEN 636
           SP  +K  D   +   L+L + V + LSG +  +   + I+  NTN+ +    +GLT+ N
Sbjct: 425 SPLVFKGDD-FTDSKILQLCASVHKELSGPILENPFMQDISDENTNSNKDTGHEGLTLLN 483

Query: 637 MNPNIVQLEYAVRGPLVIRAGEIE 708
           ++  +   E   +  + +   + E
Sbjct: 484 LDATLTSNENFAQSKIFVAPEDSE 507


>12_02_0346 - 17776871-17781445
          Length = 1524

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +2

Query: 260  ISNMRFIYVSQCG*IDRVERPHLILLLVISNRQCLHVHKK*DYF 391
            + N+ F+Y+S CG +   E   L  LL   N   L+VHK  ++F
Sbjct: 1262 LPNLTFLYISHCGNLRGGE--VLCNLLAQGNLTSLYVHKTPNFF 1303


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,623,634
Number of Sequences: 37544
Number of extensions: 275494
Number of successful extensions: 470
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)