Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P07_F_O05
(842 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 79 4e-15
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 79 4e-15
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 73 3e-13
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 72 6e-13
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 72 6e-13
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 63 3e-10
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 31 1.0
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 31 1.0
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 31 1.0
U50311-5|AAX22295.1| 299|Caenorhabditis elegans Serpentine rece... 29 4.1
AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical... 29 4.1
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 79.0 bits (186), Expect = 4e-15
Identities = 47/118 (39%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = +2
Query: 125 HFDXFMXPIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 304
+FD +M IGVGLITRKAA + P +E+R DG+ +N STFK T++ FK GEEF E+
Sbjct: 18 NFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTKLSFKLGEEFVENS 77
Query: 305 ADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMT--AKDVTCTRVYK 472
D S+ TFE L Q + V E K + T + DV C R ++
Sbjct: 78 PDDRTYNSLFTFENGKLTHRQNKIKENHKSSVLTTWLENGKLIQTYQSGDVICRREWE 135
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 79.0 bits (186), Expect = 4e-15
Identities = 38/82 (46%), Positives = 52/82 (63%)
Frame = +2
Query: 125 HFDXFMXPIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 304
+F+ +M +GVGLITRKAA + PT+E++ +GD + STFK T + FK G+EF+E
Sbjct: 16 NFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFKNTTLSFKLGQEFDETT 75
Query: 305 ADGAKVKSVCTFEGNTLKQVQK 370
DG VKSV FE +QK
Sbjct: 76 PDGRTVKSVVNFENGKFIHIQK 97
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 72.5 bits (170), Expect = 3e-13
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Frame = +2
Query: 125 HFDXFMXPIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 304
+F+ ++ +GVGL+ RKAA A PT+E++ +G+++++ STFK T ++F G EF+E
Sbjct: 17 NFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTTLEFTLGVEFDETT 76
Query: 305 ADGAKVKSVCTFEGNTLKQVQK--APDGLEVTYVREFGPEEMKAVMTAKDVTCTRVY 469
DG + KS T E + VQK + R F E++ + + V R Y
Sbjct: 77 PDGRQFKSTITIEDGKVVHVQKRIKDSDHDSVITRWFEGEKLITTLQSGSVISRRAY 133
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 71.7 bits (168), Expect = 6e-13
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = +2
Query: 125 HFDXFMXPIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 304
+FD ++ +GVG R A P +E +GDE+ + ++STFK +K+K G +E
Sbjct: 18 NFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEKT 77
Query: 305 ADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTCTRVYK 472
ADG V SV + E + L Q++ G + + + + ++ V T V CTRVY+
Sbjct: 78 ADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKCTRVYE 134
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 71.7 bits (168), Expect = 6e-13
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = +2
Query: 125 HFDXFMXPIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 304
+FD ++ +GVG R A P +E +GDE+ + ++STFK +K+K G +E
Sbjct: 33 NFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEKT 92
Query: 305 ADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTCTRVYK 472
ADG V SV + E + L Q++ G + + + + ++ V T V CTRVY+
Sbjct: 93 ADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKCTRVYE 149
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 62.9 bits (146), Expect = 3e-10
Identities = 29/73 (39%), Positives = 46/73 (63%)
Frame = +2
Query: 125 HFDXFMXPIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 304
+F+ ++ IGVGL+ RKAA+ +PT+E++ DGD ++ STFK ++ FK E+F E
Sbjct: 18 NFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNKLAFKIREKFVEIA 77
Query: 305 ADGAKVKSVCTFE 343
D ++ TFE
Sbjct: 78 PDERSYNTLVTFE 90
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 122 SHFDXFMXP-IGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 280
S +D + P IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 3 SEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 122 SHFDXFMXP-IGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 280
S +D + P IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 3 SEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 122 SHFDXFMXP-IGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 280
S +D + P IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 3 SEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U50311-5|AAX22295.1| 299|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform c protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 515 ADSRTSRGTIMFI*HLFYTLALSSFFVKLILVFTSVIVCRSNC 643
ADS + G I+F HLF+ + S F L+ + T + V +C
Sbjct: 51 ADSLHNYGQIIFTAHLFFDIQTSHFVCTLLNIPTLIGVISGSC 93
>AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical
protein Y71H2AM.17 protein.
Length = 338
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 170 RKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEE 298
+ A + TP D+ + T++T TTE K KP E+ EE
Sbjct: 296 KPAESTETPAAGTEPSTDDGAIETTTTTTTTENKEKPEEKMEE 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,697,620
Number of Sequences: 27780
Number of extensions: 322163
Number of successful extensions: 792
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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