Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_O03
         (322 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   3.7  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    20   8.4  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    20   8.4  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          20   8.4  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 22  SAQGRVVLKTP 54
           SAQGR +LK P
Sbjct: 875 SAQGRAILKIP 885


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 83  CSVXGCHSTSEKHKQASNDTFHGFPPIIEA 172
           CS+    STS      ++D   G P + E+
Sbjct: 176 CSLGTASSTSSTASSRNSDRSAGSPSVSES 205


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 119 HKQASNDTFHGFP 157
           H  AS D F+G P
Sbjct: 246 HFTASRDAFYGLP 258


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 19.8 bits (39), Expect = 8.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 114 KNTSKLVTTHFTGFLLSS 167
           KNTS +  TH+ G L ++
Sbjct: 163 KNTSAVRYTHYIGTLATN 180


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,083
Number of Sequences: 438
Number of extensions: 788
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6968808
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)