Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P07_F_O02
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    81   3e-17
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    27   0.57 
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       27   0.76 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   3.0  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   7.0  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   9.3  

>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 81.4 bits (192), Expect = 3e-17
 Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
 Frame = +1

Query: 211 VVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGAD 390
           VV  + N+ LI +NRPK  NA+      +L  A+ +F+ D      ++ G   +F +G D
Sbjct: 48  VVEKENNITLIGINRPKVRNAIDSITGRKLSAAIAEFENDPKADVGVLHGIGGSFCSGYD 107

Query: 391 IKEMQNNTYSSNTKQGFLREWEDISN-----CGKPIIAAVNGFALGGGCELAMLCDIIYA 555
           + E+             +   E +         KP++ A+ G+ + GG ELA++CD+   
Sbjct: 108 LSELAGQ-QEPQQALSIVHHPEGVMGPTRRMIRKPLVCAITGYCVAGGLELALMCDLRVM 166

Query: 556 GEKAKFGQPEINIGTIPGAGGTQRLPRYVGKSKAMEIVLTGNFFDAHE 699
            E A  G      G     GGT RLP  +G S+A++++LTG    A E
Sbjct: 167 EENAVLGFFNRRFGVPLIDGGTVRLPALIGLSRALDLILTGRTVTAKE 214


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 27.1 bits (57), Expect = 0.57
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = -2

Query: 620 VPPAPGMVPMLISG*PNFAFSPA*MISHSIASSQPPPRAKPLTAAMMGFPQL 465
           +PP PGM+P +  G P     P   +   +   +PPP   P     MG P +
Sbjct: 85  MPPRPGMIPGM-PGAPPLLMGPNGPLPPPMMGMRPPPMMVP----TMGMPPM 131


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 26.6 bits (56), Expect = 0.76
 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
 Frame = -2

Query: 296 STNNGLHRAFSAFGRFN*MSPTFFLEPTTSTLMFSYDAVL*NFIDAWLVADTTLHLFSTF 117
           + N+   RA +    F      F L P    ++FS  +VL      +  ADT L LF   
Sbjct: 148 AVNSFYQRANTEIEDFIGEGDVFSLPPCHKLMLFSGVSVLTPLAIRFNPADTALELFQFI 207

Query: 116 FPSKARV-TVATEAILRNMNHQVL 48
                RV T+ T A +R   H  L
Sbjct: 208 NAPTQRVSTMHTTAFVRRCLHNEL 231


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 516  TPKSETINSGNDGFPTVGDVLPF 448
            TP SET+  G    PTV  ++ F
Sbjct: 967  TPTSETVGGGMHRTPTVASMMTF 989


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = -1

Query: 429 CVAAVCIVLHLLNISTSRKSLLVTSDDDGSNVAVGVKIIDCLPEFNKQW 283
           CV A  I LHLL    SR      +++   +VA  ++ +  +  + ++W
Sbjct: 810 CVLAGMIPLHLLLDEDSRTFHRRRAENIAGSVARNMERVTTMERWQREW 858


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 472 GKPIIAAVNGFALGGGCELAMLCD 543
           GK  I A     +GG C+L   CD
Sbjct: 42  GKSAIVAGIVLGMGGNCKLLSRCD 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 798,396
Number of Sequences: 2352
Number of extensions: 17898
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)